Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 6/246 (2%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M+L+QL+Y V +    L+    A  ++ SQP +S+Q+R LE+ELG ++F+R+ + +  +T
Sbjct: 1   MELRQLRYFVALAEE-LHFGRAARRVHVSQPPLSQQIRALEEELGARLFDRTSRRVL-LT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           P GE  +     +L  +E            E G L +    +      P  +  F +R+P
Sbjct: 59  PEGEAFLEDVRGVLRGLEEAVDRVRGVAQGERGRLRVGFVGSAVSTRFPAGVAAFRERHP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            V L + +        AIA+G  +  +         D    P  H +  + +P+ HPL  
Sbjct: 119 AVRLELRESGTLVQRRAIAEGRLDVGLFRNLGETPDDLTTEPFLHDSYILALPERHPLAG 178

Query: 181 KEQVTIEDLAAYPLVTY---VFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMG 237
           ++ V + DL   PLV Y   VF       +  A   VG +P++   A      K  V  G
Sbjct: 179 RDSVNLADLRDVPLVMYPRPVFP-AAYDAIIEACRSVGFSPRIGQEAVSIGTQKALVAAG 237

Query: 238 IGVGVI 243
            GV ++
Sbjct: 238 TGVAIV 243