Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 5/243 (2%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L+ L+  VEVV  N   SA A  +  +Q  +SK VR LEDE G  + +RS      +T
Sbjct: 1   MNLRVLRCFVEVVR-NGGFSAAARVVCATQSTVSKAVRSLEDEYGTPLLDRSNG--VALT 57

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AGE + R A  IL+  E++ A        + GTL                +  F  RYP
Sbjct: 58  AAGETVYRRALAILAEKEALDAELGAQQSLQHGTLRFGVPPVACDRLFARPLSAFHARYP 117

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
            + + +H+     + E + +G     +A   L + +     P        V+P+ HPL+ 
Sbjct: 118 GIRMELHEAGCYALEEMVLRGELEMVLA--LLPVSERFETAPLCDEPLIAVLPEGHPLSG 175

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
           +  + +EDL   P + +  GF     +  A  R G++ +    ++    I + V  G+GV
Sbjct: 176 RPCIRLEDLDGSPFIQFEQGFALNPRIRDACLRRGVSLRETLCSSQMAFIISLVAAGLGV 235

Query: 241 GVI 243
            +I
Sbjct: 236 ALI 238