Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., LysR substrate-binding domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 9/258 (3%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L +LKYIV V     +    AE  + SQP +S  ++ LEDEL +QIFER    ++ VT
Sbjct: 1   MTLTELKYIVAVARER-HFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVS-VT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           P GE IV  A  +L +  +I+ +A +   P  G L +   +T   Y LP ++K      P
Sbjct: 59  PVGEQIVTQAQRVLEQTMAIREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTVP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           ++ L + +    ++ E + +G  + AI  E        + +P Y     + VP+ H L K
Sbjct: 119 QMPLMLQENFTVRLVELLKQGEIDCAIMAEPFP-EAGLMTVPLYDEPFVVAVPRGHELAK 177

Query: 181 KEQVTIEDLAAYPLVTYVFGFTGRSEL------DSAFNRVGMTPKVVFTATDADVIKTYV 234
              V  E L    ++    G   R  +       S F++     +  F  +  + I+  V
Sbjct: 178 ASSVDPEALKQQTMLLLGNGHCFRDHVLGVCPELSRFSQNADGIQKTFEGSSLETIRHMV 237

Query: 235 RMGIGVGVIASMAVDKKQ 252
             G+G+ V+   +V   Q
Sbjct: 238 ASGVGITVLPRTSVPNMQ 255