Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 9/306 (2%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M ++ L+  V ++   LN S  AE L+ +QP +S+Q+R LE+ LG Q+ +R+ + L+ +T
Sbjct: 1   MNIRALQCFV-ILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLS-LT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
            AG ++   A +IL  +E +  VA E      G L++  T +     LP  +K F K YP
Sbjct: 59  EAGHYLCNEARQILGSLEQVTLVAQEIGVGRRGWLSVGFTRSSMYSVLPPALKAFHKAYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
           +V L + +    + ++A+     +  I  + L + +               +   HPL  
Sbjct: 119 QVELKLFEMLTEEQTDALRDMRIHIGIGRQPLTV-EGFTSHTLLRERVVAALEPSHPLAA 177

Query: 181 KEQVTIEDLAAYPLVTYVFGFTG--RSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGI 238
           +++V+I DLA  PL+ Y        +  + S +   G+TP V   A +       V  G+
Sbjct: 178 QKKVSIADLADTPLILYPKHQNAQFKRSVQSLYRDAGITPLVAHEAYEIQTAIALVAAGL 237

Query: 239 GVGVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRP 298
           GV  I   +V +   TD+V     H+    ++       TF        +  F   L  P
Sbjct: 238 GVTFIGE-SVARLGRTDVV---YRHLTGPGSSYRSTLAATFRTEDASPHLRAFLACLPEP 293

Query: 299 VVEQAI 304
           + + A+
Sbjct: 294 LKDSAL 299