Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  106 bits (264), Expect = 8e-28
 Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 21/277 (7%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M   QL     V  H  N+S  A  L+ SQP +S Q+R L+DE G  +++R G+ + ++T
Sbjct: 1   MTPDQLITFAAVAEHR-NISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGV-RLT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           PAGE +   AT +        A        E GTL I  + T A Y LP +I  F +RYP
Sbjct: 59  PAGEQLASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVV---PKDHP 177
            V+LH   G  T++  A+             + L  D  +   + W    +V   P+ HP
Sbjct: 119 DVTLHTADGNTTEIVGALDSVDIAMIEGPVGVDLPPDTAV---HSWREDEIVAIMPRTHP 175

Query: 178 LTKKE------------QVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTAT 225
           L +              Q  +     YPLV    G   R  ++ AF R G+  +V     
Sbjct: 176 LAELALSAQSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVALEIA 235

Query: 226 DADVIKTYVRMGIGVGVIASMAVDKKQDTDLVAIDAS 262
             + +K  VR G+G+G +++M++ + +D  L  +  S
Sbjct: 236 GVEGVKEAVRAGMGIGFVSAMSM-RHEDRALCLLSLS 271