Pairwise Alignments

Query, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  107 bits (266), Expect = 5e-28
 Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 33/336 (9%)

Query: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
           M L +LKYIV V     +    AE  + SQP +S  ++ LEDEL +QIFER G     VT
Sbjct: 1   MTLTELKYIVAVARER-HFGRAAEACFVSQPTLSVAIKKLEDELNVQIFER-GTSEVSVT 58

Query: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
           P GE IV  A  +L +  +IK +A +   P +G L +   +T   Y LP ++K   KR P
Sbjct: 59  PIGEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVP 118

Query: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIML-PCYHWNRSIVVPKDHPLT 179
           ++ L + +    ++ E + +G  + AI   AL   +  +ML P Y     + +P  H   
Sbjct: 119 QMPLMLQENYTLKLIELLKQGEIDVAIM--ALPFPETGLMLRPLYDEPFVVALPSGHAWE 176

Query: 180 KKEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVV------------FTATDA 227
            + ++  +DL    ++    G   R  +      +G+ P+++            F  +  
Sbjct: 177 NRPKIDADDLKQETMLLLGSGHCFRDHV------LGVCPELMRFSQNADGIQKTFEGSSL 230

Query: 228 DVIKTYVRMGIGVGVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDF 287
           + I+  V  G+G+ V+  M+V +      V   A  I S   + + F      R  +  +
Sbjct: 231 ETIRHMVASGVGITVLPRMSVHE------VKPHAGGIDSGLLSYVAFDEPVPDRRVVLAW 284

Query: 288 MERFAPHLTRPVVEQAISLKSNIEIAEMFKDIDLPV 323
            + F      P +E      S+ ++A + K +DLPV
Sbjct: 285 RKSFT---RMPAIEAICDAISSCDLAGV-KKLDLPV 316