Pairwise Alignments

Query, 960 a.a., DNA translocase FtsK from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., cell divisionFtsK/SpoIIIE (RefSeq) from Shewanella loihica PV-4

 Score =  709 bits (1831), Expect = 0.0
 Identities = 354/500 (70%), Positives = 421/500 (84%), Gaps = 1/500 (0%)

Query: 462 KPTEPMPTLELLYHPEKRENFIDREALEEIARLVESKLADYKIQAQVVDIFPGPVITRFE 521
           KP  P+P + LL  P ++ N I +E L+++ARLVE KLAD+ I A+VV +FPGPV+TRFE
Sbjct: 341 KPVTPLPDISLLDVPNRKTNPISQEELDQVARLVEVKLADFNIVAKVVGVFPGPVVTRFE 400

Query: 522 LDLAPGVKVSRISSLSMDLARSLSAMAVRVVEVIPGKPYVGLELPNMSRQTVYLSDVIAS 581
           L+LAPGVK S+I++LS DLARSL A +VRVVEVIPGK YVGLE+PN  R+TV++ DV+ S
Sbjct: 401 LELAPGVKASKITNLSKDLARSLLAESVRVVEVIPGKAYVGLEIPNKFRETVFMRDVLGS 460

Query: 582 PQFKESKSPTTVVLGQDIAGDAVVADLSKMPHVLVAGTTGSGKSVGVNVMILSMLYKASP 641
             F+ SKS  ++VLGQDI+G+ VV DL KMPH+LVAGTTGSGKSVGVNVMI S+LYK+ P
Sbjct: 461 EAFEHSKSHLSMVLGQDISGEPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGP 520

Query: 642 EDVRFIMIDPKMLELSVYEGIPHLLAEVVTDMKDASNALRWCVGEMERRYKLMSVLGVRN 701
           +DVRFIMIDPKMLELSVYEGIPHLL EVVTDMK+A+N+LRWCVGEMERRYKLMS LGVRN
Sbjct: 521 DDVRFIMIDPKMLELSVYEGIPHLLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRN 580

Query: 702 IKGFNDKLRMAAEAGHPIYDPLWKDGDSMESEPPLLEKLPYIVVVVDEFADLMMVVGKKV 761
           +KG+N K++ A E G  I DPLW+  DSME   P L+KLP IVV+VDEFAD+MM+VGKKV
Sbjct: 581 LKGYNAKIKEAKERGEEITDPLWRSQDSMEEHAPELDKLPSIVVIVDEFADMMMIVGKKV 640

Query: 762 EELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRVAFTVSTKTDSRTILDQSG 821
           EELIAR+AQKARAAGIHLILATQRPSVDVITGLIKANIPTR+AF VS++ DSRTILDQ G
Sbjct: 641 EELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQG 700

Query: 822 AESLLGMGDMLYLPAGSSHTIRVHGAFASDDDVHAVVNNWKARGKPNYISEIIQGD-HGP 880
           AE+LLGMGDMLYLP G+S  IRVHGAF  D +VHAVV +W +RGKP YI EI+QG   G 
Sbjct: 701 AETLLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHAVVADWHSRGKPQYIDEILQGSAEGE 760

Query: 881 EALLPGEQSESDEELDPLFDQVVEHVVETRRGSVSGVQRRFKIGYNRAARIVEQLEAQGI 940
           + LLPGE +E+DEE+D L+D+ V  V ETRRGS+S VQR+FKIGYNRAARI+EQ+E QG+
Sbjct: 761 QVLLPGEAAENDEEMDSLYDEAVAFVTETRRGSISSVQRKFKIGYNRAARIIEQMEMQGV 820

Query: 941 VSAPGHNGNRDVLAPAPIRD 960
           VS+ GHNGNR+VLAP P +D
Sbjct: 821 VSSQGHNGNREVLAPPPPKD 840



 Score =  167 bits (423), Expect = 3e-45
 Identities = 101/248 (40%), Positives = 136/248 (54%), Gaps = 28/248 (11%)

Query: 24  LNGSQRLKESGLILAFLFSIFLAVALFSFNPADPSWSQTAWGTDIHNAGGLVGAWLADTL 83
           L+G QRL E GLIL  + + ++ +AL SF+ +DP WSQ+ +  +I N  G VGAWLAD L
Sbjct: 10  LSGLQRLLEGGLILCCMVATYILLALSSFHSSDPGWSQSNFEGEIKNVTGAVGAWLADVL 69

Query: 84  FFVFGSLAYPLPFITAFAAWVLLRKRDEGDEIDFTLWGTRLLGLTIVLLTSCGLADINFD 143
           F+ FG  AY +P I A   W+L ++     EID+   G RL+G  ++  +   LA +N +
Sbjct: 70  FYFFGYTAYLIPIIVAVTGWLLFKRIHRLLEIDYFSVGLRLIGFLLITFSLASLASMNAN 129

Query: 144 DIWYFSSGGVIGDVLTSLALPTLNILGTTLVLLFLWGAGITLLTGISWLRIVEWIGERSI 203
           DI+ FS+GGV GDV+    LP  N LGTTL+LL   GAG TLLTGISWL +VE +G  +I
Sbjct: 130 DIYEFSAGGVSGDVIADAMLPYFNQLGTTLLLLCFVGAGFTLLTGISWLTVVEVVGFATI 189

Query: 204 ----------------------AAFVGLFNRLRGEKAERVKPALVKPELPVEELEPTFSA 241
                                   F+ +F+R    K  R + AL K E   EE+      
Sbjct: 190 WCLKQLKHVPEKFSSAPETDDTKGFMSVFDRF---KESRRQKALAKAE---EEVYEDDQD 243

Query: 242 SMDTEIDE 249
             D E DE
Sbjct: 244 DYDDEYDE 251