Pairwise Alignments

Query, 960 a.a., DNA translocase FtsK from Vibrio cholerae E7946 ATCC 55056

Subject, 911 a.a., cell division protein FtsK, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  852 bits (2200), Expect = 0.0
 Identities = 496/947 (52%), Positives = 617/947 (65%), Gaps = 66/947 (6%)

Query: 24  LNGSQRLKESGLILAFLFSIFLAVALFSFNPADPSWSQTAWGTDIHNAGGLVGAWLADTL 83
           L+G QRL E GLI+  + + ++ +AL SF+P+DP WSQ+ +  DI N  G VGAW+AD L
Sbjct: 10  LSGLQRLLEGGLIICCVLAAYILLALTSFSPSDPGWSQSHFQGDIKNWTGAVGAWIADIL 69

Query: 84  FFVFGSLAYPLPFITAFAAWVLLRKRDEGDEIDFTLWGTRLLGLTIVLLTSCGLADINFD 143
            + FG  AY +P I A   W+L ++  +  EID+     R++G  +++L    LA +N +
Sbjct: 70  LYFFGVTAYIMPIIVASTGWLLFKRAHDLLEIDYFSVALRIIGFLLLILGFSALASMNAN 129

Query: 144 DIWYFSSGGVIGDVLTSLALPTLNILGTTLVLLFLWGAGITLLTGISWLRIVEWIGERSI 203
           +I+ FS+GGV GDV+    LP  N LGTTL+LL   G+G TLLTGISWL +VE IG  SI
Sbjct: 130 NIYEFSAGGVAGDVIGQAMLPYFNKLGTTLLLLCFLGSGFTLLTGISWLTVVEKIGFVSI 189

Query: 204 AAFVGLFNRLRGEKAERVKPALVKPELPVEELEPTFSA-SMDTEIDEPAPSLRRFNIHMP 262
            +F  L  RL         P  +K E   E+     S      E  +    L +     P
Sbjct: 190 WSFKQL-KRL---------PQALKREHETEDTRGFMSVVDKFKERRDSQHVLDKAKARQP 239

Query: 263 EERDVPDIHFEP-QVEPKVELKPEPPRQREPAPHFSRVAAQNTQV---EPVSSARTQQWD 318
            E     +H      E   E   E    +       ++ + N+     EP S  R     
Sbjct: 240 AETPSRVLHTRAIPEESHEEFITEASSGKGKLSSLVKILSFNSNKAKDEPKSQQR----- 294

Query: 319 ATIEELEQQARLVDDYAVEDDAVPSVLTSSTLSDVEDSILTTAISVDEEEESLSENFNHS 378
             +E    QA  V +Y    +A P V                A S D E + +    N  
Sbjct: 295 --VEPQLDQASAVAEYG-HFEAPPWV----------------AKSHDAELDDVDTGLNAE 335

Query: 379 FNIEVEDEEVEPSIANLHWSDDEDELEETPSVMVSPAIESDWEDEDEPDDRDVAAFQNIV 438
           F    ED++ +  + +     DED+  +T S            ++D+  D D       V
Sbjct: 336 F---FEDDDGDEPVFHRETMIDEDD--DTLSF-----------NDDDVIDFDTKVSAGAV 379

Query: 439 SQAQANAAAQQNPFLVQKAVNLP---------KPTEPMPTLELLYHPEKRENFIDREALE 489
           +QAQ      +   +V   V LP         KP +P+P++ LL  P++++N I  E LE
Sbjct: 380 TQAQRQKQTPKAK-IVDGIVVLPGQEDKPVPTKPMDPLPSVSLLDVPDRKKNPISPEELE 438

Query: 490 EIARLVESKLADYKIQAQVVDIFPGPVITRFELDLAPGVKVSRISSLSMDLARSLSAMAV 549
           ++ARLVE+KLAD+ I A VV ++PGPVITRFEL+LAPG+K S+IS+L+ DLARSL A  V
Sbjct: 439 QVARLVEAKLADFNIVATVVGVYPGPVITRFELELAPGIKASKISNLANDLARSLLAERV 498

Query: 550 RVVEVIPGKPYVGLELPNMSRQTVYLSDVIASPQFKESKSPTTVVLGQDIAGDAVVADLS 609
           RVVEVIPGK YVGLELPN  R+TVY+ DV+    F +SKS  T+VLGQDI+G+ VV DL 
Sbjct: 499 RVVEVIPGKSYVGLELPNKFRETVYMRDVLDCEAFSQSKSNLTMVLGQDISGEPVVVDLG 558

Query: 610 KMPHVLVAGTTGSGKSVGVNVMILSMLYKASPEDVRFIMIDPKMLELSVYEGIPHLLAEV 669
           KMPH+LVAGTTGSGKSVGVNVMI S+LYK+ PEDVRFIMIDPKMLELSVYEGIPHLL EV
Sbjct: 559 KMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPEDVRFIMIDPKMLELSVYEGIPHLLCEV 618

Query: 670 VTDMKDASNALRWCVGEMERRYKLMSVLGVRNIKGFNDKLRMAAEAGHPIYDPLWKDGDS 729
           VTDMK+A+NALRWCVGEMERRYKLMS++GVRNIKG+N K+  A   G  IYDP+WK  DS
Sbjct: 619 VTDMKEAANALRWCVGEMERRYKLMSMMGVRNIKGYNAKIAEAKVNGEVIYDPMWKSSDS 678

Query: 730 MESEPPLLEKLPYIVVVVDEFADLMMVVGKKVEELIARLAQKARAAGIHLILATQRPSVD 789
           ME E P L+KLP IVVVVDEFAD+MM+VGKKVEELIAR+AQKARAAGIHLILATQRPSVD
Sbjct: 679 MEPEAPALDKLPSIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVD 738

Query: 790 VITGLIKANIPTRVAFTVSTKTDSRTILDQSGAESLLGMGDMLYLPAGSSHTIRVHGAFA 849
           VITGLIKANIPTR+AF VS++ DSRTILDQ GAE+LLGMGDMLYLP G++   RVHGAF 
Sbjct: 739 VITGLIKANIPTRMAFQVSSRIDSRTILDQQGAETLLGMGDMLYLPPGTAVPNRVHGAFI 798

Query: 850 SDDDVHAVVNNWKARGKPNYISEIIQG-DHGPEALLPGEQSESDEELDPLFDQVVEHVVE 908
            D +VH VV +W ARGKP YI EI+ G   G + LLPGE +ESDEE DPL+D+ V  V E
Sbjct: 799 DDHEVHRVVADWCARGKPQYIDEILNGVSEGEQVLLPGETAESDEEYDPLYDEAVAFVTE 858

Query: 909 TRRGSVSGVQRRFKIGYNRAARIVEQLEAQGIVSAPGHNGNRDVLAP 955
           TRRGS+S VQR+FKIGYNRAARI+EQ+E QG+VSA GHNGNR+VLAP
Sbjct: 859 TRRGSISSVQRKFKIGYNRAARIIEQMEMQGVVSAQGHNGNREVLAP 905