Pairwise Alignments

Query, 960 a.a., DNA translocase FtsK from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., DNA translocase FtsK (RefSeq) from Shewanella sp. ANA-3

 Score =  859 bits (2219), Expect = 0.0
 Identities = 499/948 (52%), Positives = 615/948 (64%), Gaps = 62/948 (6%)

Query: 24  LNGSQRLKESGLILAFLFSIFLAVALFSFNPADPSWSQTAWGTDIHNAGGLVGAWLADTL 83
           L+G QRL E GLI+  + + ++ +AL SF+P+DP WSQ+ +  DI N  G VGAW+AD L
Sbjct: 10  LSGLQRLLEGGLIICCVLATYILLALTSFSPSDPGWSQSHFQGDIKNWTGAVGAWIADIL 69

Query: 84  FFVFGSLAYPLPFITAFAAWVLLRKRDEGDEIDFTLWGTRLLGLTIVLLTSCGLADINFD 143
            + FG  AY +P I A   W+L ++  +  EID+     R++G  +++L    LA +N +
Sbjct: 70  LYFFGVTAYIMPIIVASTGWLLFKRAHDLLEIDYFSVALRIIGFLLLILGFSALASMNAN 129

Query: 144 DIWYFSSGGVIGDVLTSLALPTLNILGTTLVLLFLWGAGITLLTGISWLRIVEWIGERSI 203
           +I+ FS+GGV GDV+    LP  N LGTTL+LL   G+G TLLTGISWL +VE +G  SI
Sbjct: 130 NIYEFSAGGVAGDVIGQAMLPYFNKLGTTLLLLCFLGSGFTLLTGISWLTVVEKVGFVSI 189

Query: 204 AAFVGLFNRLRGEKAERVKPALVKPELPVEELEPTFSASMDTEID------EPAPSLRRF 257
             F          K +R+  AL +      E E   +    T +D      +    L + 
Sbjct: 190 WCF---------RKLKRLPQALKR------ERETEDTRGFMTVVDKFKQRRDSQHQLEKA 234

Query: 258 NIHMPEERDVPDIHFEPQVEPKVELKPEPPRQREPAPHFSRVAAQNTQVEPVSSARTQQW 317
            +  PE          P  E K E+  E   +           A+   +    +    + 
Sbjct: 235 RVREPEVAPSRIFTTRPVKEEKEEVSDEIITEASTGKGKLSALAKILSLNSNKAKAEPKG 294

Query: 318 DATIEELEQQARLVDDYAVEDDAVPSVLTSSTLSDVEDSILTTAISVDEEEESLSENFNH 377
              +E    QA  V ++    +A P V                A  +D E+E+  E   H
Sbjct: 295 QQRVEPQLDQASAVAEHG-HFEAPPWVAKPK------------AAELDLEDET--EFKAH 339

Query: 378 SFNIEVEDEEVEPSIANLHWSDDEDELEETPSVMVSPAIESDWEDEDEPDDRDVAAFQNI 437
            F  E +D + EP        DDEDE             E  + DED  D  D  A    
Sbjct: 340 VF--EDDDGDDEPVFHRETMLDDEDE------------DELGFNDEDVIDF-DTKASTGA 384

Query: 438 VSQAQANAAAQQNPFLVQKAVNLP---------KPTEPMPTLELLYHPEKRENFIDREAL 488
           V+QAQ    A +   +V   V LP         KP +P+P + LL  P +++N I  E L
Sbjct: 385 VTQAQRQKEAPKAK-IVDGIVVLPGQEDKPVPAKPMDPLPNISLLDVPNRKKNPISPEEL 443

Query: 489 EEIARLVESKLADYKIQAQVVDIFPGPVITRFELDLAPGVKVSRISSLSMDLARSLSAMA 548
           E++ARLVE+KLAD+ I A VV ++PGPVITRFELDLAPG+K S+IS+L+ DLARSL A  
Sbjct: 444 EQVARLVEAKLADFNIVATVVGVYPGPVITRFELDLAPGIKASKISNLANDLARSLLAER 503

Query: 549 VRVVEVIPGKPYVGLELPNMSRQTVYLSDVIASPQFKESKSPTTVVLGQDIAGDAVVADL 608
           VRVVEVIPGK YVGLELPN  R+TVY+ DV+    F ESKS  T+VLGQDI+G+ VV DL
Sbjct: 504 VRVVEVIPGKSYVGLELPNKFRETVYMRDVLDCEAFTESKSNLTMVLGQDISGEPVVVDL 563

Query: 609 SKMPHVLVAGTTGSGKSVGVNVMILSMLYKASPEDVRFIMIDPKMLELSVYEGIPHLLAE 668
            KMPH+LVAGTTGSGKSVGVNVMI S+LYK+ PEDVRFIMIDPKMLELSVYEGIPHLL E
Sbjct: 564 GKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPEDVRFIMIDPKMLELSVYEGIPHLLCE 623

Query: 669 VVTDMKDASNALRWCVGEMERRYKLMSVLGVRNIKGFNDKLRMAAEAGHPIYDPLWKDGD 728
           VVTDMK+A+NALRWCVGEMERRYKLMS++GVRNIKG+N K+  A   G  I DP+WK  D
Sbjct: 624 VVTDMKEAANALRWCVGEMERRYKLMSMMGVRNIKGYNAKIAEAKANGEVILDPMWKSSD 683

Query: 729 SMESEPPLLEKLPYIVVVVDEFADLMMVVGKKVEELIARLAQKARAAGIHLILATQRPSV 788
           SME E P L+KLP IVVVVDEFAD+MM+VGKKVEELIAR+AQKARAAGIHLILATQRPSV
Sbjct: 684 SMEPEAPALDKLPSIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSV 743

Query: 789 DVITGLIKANIPTRVAFTVSTKTDSRTILDQSGAESLLGMGDMLYLPAGSSHTIRVHGAF 848
           DVITGLIKANIPTR+AF VS++ DSRTILDQ GAE+LLGMGDMLYLP G++   RVHGAF
Sbjct: 744 DVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAETLLGMGDMLYLPPGTAVPNRVHGAF 803

Query: 849 ASDDDVHAVVNNWKARGKPNYISEIIQG-DHGPEALLPGEQSESDEELDPLFDQVVEHVV 907
             D +VH VV +W ARGKP YI EI+ G   G + LLPGE +ESDEE DPL+D+ V  V 
Sbjct: 804 IDDHEVHRVVADWCARGKPQYIDEILNGVSEGEQVLLPGETAESDEEYDPLYDEAVAFVT 863

Query: 908 ETRRGSVSGVQRRFKIGYNRAARIVEQLEAQGIVSAPGHNGNRDVLAP 955
           ETRRGS+S VQR+FKIGYNRAARI+EQ+E QG+VSA GHNGNR+VLAP
Sbjct: 864 ETRRGSISSVQRKFKIGYNRAARIIEQMEMQGVVSAQGHNGNREVLAP 911