Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., sodium/proton antiporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  724 bits (1868), Expect = 0.0
 Identities = 372/531 (70%), Positives = 435/531 (81%), Gaps = 4/531 (0%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           MP++LG +   NFLG +P WYK AI++FL INPI+F+ +NPF+AGW+LV++FIFTLAMAL
Sbjct: 1   MPLTLGQSLFANFLGNSPRWYKFAILSFLAINPILFY-LNPFIAGWVLVIQFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPLQPGGLLAIEA+ IGMTSP QV HE+ AN+EVLLLLVFMVAGIYFMKQLLL+ FTK
Sbjct: 60  KCYPLQPGGLLAIEAVIIGMTSPTQVLHEIQANLEVLLLLVFMVAGIYFMKQLLLYAFTK 119

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           +L  +RSK+++S+ F + +AFLSAFLDALTVIAVII+VAVGFYSIYHKVASG+   S HD
Sbjct: 120 MLTKVRSKIVVSMLFCIASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSSDHD 179

Query: 181 HTHDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGWQFGE 240
           HT  E   +L   +LE++R FLR+LLMHAGVGTALGGV TMVGEPQNLIIA QA WQFGE
Sbjct: 180 HT-SEAPEQLNESELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANWQFGE 238

Query: 241 FLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTNQDVA 300
           F +RM+PVTVPVF AG+LTC +VEKF+ FGYGA+LP  V +IL ++D+ E   RT +D  
Sbjct: 239 FAIRMSPVTVPVFFAGILTCFIVEKFKWFGYGAKLPEAVHKILSEYDAYEDARRTPKDKV 298

Query: 301 KLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPFTALL 360
           KL VQ  + VWLIVGLA HLA+VGLIGLSVIIL TAF G+ +EH+LGKAFEEALPFTALL
Sbjct: 299 KLIVQALVGVWLIVGLAFHLASVGLIGLSVIILNTAFNGITDEHALGKAFEEALPFTALL 358

Query: 361 AVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVYITEV 420
           AVFF++V VIIDQ+LF PVI   L+ E +  QL +FY+ANGLLSMVSDNVFVGTVYI EV
Sbjct: 359 AVFFAVVGVIIDQQLFAPVIQWALSYEGN-VQLVIFYIANGLLSMVSDNVFVGTVYINEV 417

Query: 421 KTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVI 480
           K AL+ G I+RDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMV+
Sbjct: 418 KAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVM 477

Query: 481 MAFPYTLALSLVGFIGI-MFLLEPMTEVFYSLGWISHHVAPAADALLQSGH 530
           MA PYT+ LS+VG + I    L  MT+ FY    I+HH A  A      GH
Sbjct: 478 MALPYTIVLSIVGILAIESGFLTDMTQYFYDSHLINHHTAAEAAGKALGGH 528