Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., sodium/proton antiporter (RefSeq) from Shewanella loihica PV-4

 Score =  727 bits (1877), Expect = 0.0
 Identities = 380/534 (71%), Positives = 437/534 (81%), Gaps = 7/534 (1%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           MP+++  AFI NFLG +P W+K+AI++FL+INPIVF+ +NPF+AGWLLVVEFIFTLAMAL
Sbjct: 1   MPVTMSQAFIDNFLGNSPKWFKIAILSFLVINPIVFY-LNPFVAGWLLVVEFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPLQPGGLLAIEA+ IGMTSP QV HE+ AN+EVLLLL+FMVAGIYFMKQLLLF+FTK
Sbjct: 60  KCYPLQPGGLLAIEAVIIGMTSPSQVLHEIEANLEVLLLLIFMVAGIYFMKQLLLFVFTK 119

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           ++  IRSKV++S+ F + +AFLSAFLDALTVIAVII+VAVGFYSIYHKVASG+S    HD
Sbjct: 120 MITKIRSKVVVSLMFCIASAFLSAFLDALTVIAVIIAVAVGFYSIYHKVASGKSFTDDHD 179

Query: 181 HT---HDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGWQ 237
           HT   H EG S L  D+LE +R FLR+LLMHAG+GTALGGV TMVGEPQNLIIA QA WQ
Sbjct: 180 HTSDSHGEGHS-LCEDELEAFRGFLRNLLMHAGIGTALGGVCTMVGEPQNLIIAAQANWQ 238

Query: 238 FGEFLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTNQ 297
           FGEF LRM PVTVPVFI+G+ TC LVEKF+ FGYG +LP  V +IL D+ S E  +RT  
Sbjct: 239 FGEFALRMGPVTVPVFISGIATCFLVEKFKWFGYGQQLPEAVHKILSDYASYEDAHRTKH 298

Query: 298 DVAKLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPFT 357
           D  KL +Q  + VWLIVGLA HLA+VGLIGLSVIIL TAF GV  EH+LGKAFEEALPFT
Sbjct: 299 DKIKLVIQAFVGVWLIVGLAFHLASVGLIGLSVIILTTAFNGVTNEHALGKAFEEALPFT 358

Query: 358 ALLAVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVYI 417
           ALLAVFF+IV VIIDQ+LF PVI   L+ E + TQL +FY+ANGLLSMVSDNVFVGTVYI
Sbjct: 359 ALLAVFFAIVGVIIDQQLFAPVIQWALSYEGN-TQLVIFYIANGLLSMVSDNVFVGTVYI 417

Query: 418 TEVKTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 477
            EVK AL++G I+RDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSA+APLIRLSYGR
Sbjct: 418 NEVKAALLDGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSAIAPLIRLSYGR 477

Query: 478 MVIMAFPYTLALSLVGFIGI-MFLLEPMTEVFYSLGWISHHVAPAADALLQSGH 530
           MV MA PYT+ LS+VG + I    L  MT+ FY    + HH    A     +GH
Sbjct: 478 MVWMALPYTIVLSIVGILAIETGFLGEMTQYFYDSHMLIHHSVAEAAKGAVTGH 531