Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  749 bits (1935), Expect = 0.0
 Identities = 385/522 (73%), Positives = 443/522 (84%), Gaps = 6/522 (1%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           MPM++  AFI NFLG +P WYK+AI++FLIINPI+FF+++PF+AGW+LV+EFIFTLAMAL
Sbjct: 1   MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMAL 60

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPLQPGGLLAIEA+AIGMTS  QV HE+ AN+EVLLLLVFMVAGIYFMKQLLLF FTK
Sbjct: 61  KCYPLQPGGLLAIEAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTK 120

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           ++  +RSK+L+S+ F + +AFLSAFLDALTVIAVII+VAVGFYSIYHKVASG+   + HD
Sbjct: 121 MITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHD 180

Query: 181 HT----HDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGW 236
           HT    ++EG  +L   +LE++R FLR+LLMHAGVGTALGGV TMVGEPQNLIIA QA W
Sbjct: 181 HTSENKNEEGEDQLNEAELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 240

Query: 237 QFGEFLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTN 296
           QFGEF +RM+PVTVPVFIAG+LTC +VEKFRIFGYGA+LP  V +IL D+D+ E   RTN
Sbjct: 241 QFGEFAIRMSPVTVPVFIAGILTCYIVEKFRIFGYGAQLPDAVHKILCDYDAHEDARRTN 300

Query: 297 QDVAKLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPF 356
           +D  KL VQ  I VWLI GLALHLA+VGLIGLSVIILATAF G+ +EH+LGKAFEEALPF
Sbjct: 301 KDKMKLIVQAFIGVWLIAGLALHLASVGLIGLSVIILATAFNGITDEHALGKAFEEALPF 360

Query: 357 TALLAVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVY 416
           TALLAVFFS+VAVIIDQ+LF PVI   LN E + TQL +FY+ANGLLSMVSDNVFVGTVY
Sbjct: 361 TALLAVFFSVVAVIIDQQLFAPVIQWALNHEGN-TQLVIFYIANGLLSMVSDNVFVGTVY 419

Query: 417 ITEVKTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG 476
           I EVK AL+ G I+RDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG
Sbjct: 420 INEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG 479

Query: 477 RMVIMAFPYTLALSLVGFIGIMF-LLEPMTEVFYSLGWISHH 517
           RMV MA PYT+ LS+VG + I    LE MT+ FY    I HH
Sbjct: 480 RMVWMALPYTIVLSIVGVMAIQIGFLEQMTQYFYDSHAILHH 521