Pairwise Alignments

Query, 530 a.a., Na+/H+ antiporter NhaB from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., sodium/proton antiporter (RefSeq) from Shewanella sp. ANA-3

 Score =  741 bits (1914), Expect = 0.0
 Identities = 382/532 (71%), Positives = 446/532 (83%), Gaps = 11/532 (2%)

Query: 1   MPMSLGNAFIKNFLGKAPDWYKVAIIAFLIINPIVFFFINPFLAGWLLVVEFIFTLAMAL 60
           MPM++  AFI NFLG +P WYK+AI++FLIINPI+FF+++PF+AGW+LV+EFIFTLAMAL
Sbjct: 1   MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMAL 60

Query: 61  KCYPLQPGGLLAIEAIAIGMTSPGQVKHELVANIEVLLLLVFMVAGIYFMKQLLLFIFTK 120
           KCYPLQPGGLLAIEA+AIGMTS  QV HE+ AN+EVLLLLVFMVAGIYFMKQLLLF+FTK
Sbjct: 61  KCYPLQPGGLLAIEAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFVFTK 120

Query: 121 ILLGIRSKVLLSIAFSVTAAFLSAFLDALTVIAVIISVAVGFYSIYHKVASGQSVHSSHD 180
           ++  +RSK+L+S+ F + +AFLSAFLDALTVIAVII+VAVGFYSIYHKVASG+   + HD
Sbjct: 121 MITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHD 180

Query: 181 HT----HDEGISELTRDDLENYRAFLRSLLMHAGVGTALGGVTTMVGEPQNLIIADQAGW 236
           HT    +D+G ++L  D+LE++R FLR+LLMHAGVGTALGGV TMVGEPQNLIIA QA W
Sbjct: 181 HTSEGKNDDGENQLNEDELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 240

Query: 237 QFGEFLLRMAPVTVPVFIAGMLTCMLVEKFRIFGYGARLPANVRQILLDFDSEERKNRTN 296
           QFGEF +RM+PVTVPV  AG+LTC +VEKFR FGYGA+LP  V +IL D+ + E   RTN
Sbjct: 241 QFGEFAIRMSPVTVPVLFAGILTCFIVEKFRWFGYGAQLPDAVHKILCDYAAYEDARRTN 300

Query: 297 QDVAKLWVQGAIAVWLIVGLALHLAAVGLIGLSVIILATAFTGVIEEHSLGKAFEEALPF 356
           +D  KL +Q  + VWLI GLALHLA+VGLIGLSVIIL TAF G+ +EH+LGKAFEEALPF
Sbjct: 301 KDKMKLVIQAFVGVWLIAGLALHLASVGLIGLSVIILTTAFNGITDEHALGKAFEEALPF 360

Query: 357 TALLAVFFSIVAVIIDQELFKPVIDAVLNVEDHGTQLALFYVANGLLSMVSDNVFVGTVY 416
           TALLAVFF++VAVIIDQ+LF PVI   LN E + TQL +FY+ANGLLSMVSDNVFVGTVY
Sbjct: 361 TALLAVFFAVVAVIIDQQLFGPVIQWALNHEGN-TQLVIFYIANGLLSMVSDNVFVGTVY 419

Query: 417 ITEVKTALMEGMISRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG 476
           I EVK AL+ G I+RDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG
Sbjct: 420 INEVKAALINGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYG 479

Query: 477 RMVIMAFPYTLALSLVGFIGIMF-LLEPMTEVFYSLGWISHH-----VAPAA 522
           RMV MA PYT+ LS+VG + I    LE MT+ FY    I HH     +APAA
Sbjct: 480 RMVWMALPYTIVLSIVGVMAIQSGFLEQMTQYFYDSHAILHHSVKEALAPAA 531