Pairwise Alignments

Query, 279 a.a., fatty acid metabolism transcriptional regulator FadR from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., fatty acid metabolism regulator (RefSeq) from Shewanella loihica PV-4

 Score =  240 bits (612), Expect = 3e-68
 Identities = 131/269 (48%), Positives = 167/269 (62%), Gaps = 40/269 (14%)

Query: 2   VIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWL 61
           +I+AK PA FAEKYI+ SIW G+FPPGSILPAERELSELIGVTRTTLREVLQRLARDGWL
Sbjct: 16  IIEAKGPASFAEKYIVRSIWEGKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWL 75

Query: 62  TIQHGKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLNK 121
           TIQHGKPT+VN   ETSGL++L+T+  L+      ++E LL+ARTNIS I+ + A + N 
Sbjct: 76  TIQHGKPTRVNDIWETSGLNVLETIADLNPAGEPVLLEQLLSARTNISAIYFKGAVRYNP 135

Query: 122 ESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKTF 181
           +        V+E+   L                      +K+D             AK F
Sbjct: 136 D-------KVLEALAPLAT--------------------LKDD-------------AKAF 155

Query: 182 NFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQLLAVCQ 241
             +DY L   LA+HSGN +Y LI NG K LY RVG  YF+  +ARELA++FY+ L A+ +
Sbjct: 156 IEFDYQLHHTLAYHSGNPLYVLILNGFKGLYSRVGEEYFAIEKARELALDFYQALEALAK 215

Query: 242 SGEREHLPQVIRQYGIASGHIWNQMKMTL 270
                 +P ++R YGI SG +W + K  L
Sbjct: 216 DHNHNDVPVLMRSYGINSGKVWQRYKANL 244