Pairwise Alignments

Query, 279 a.a., fatty acid metabolism transcriptional regulator FadR from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., fatty acid metabolism regulator protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (645), Expect = 4e-72
 Identities = 134/278 (48%), Positives = 176/278 (63%), Gaps = 40/278 (14%)

Query: 1   MVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW 60
           M+I AK PA FAEKYI+ SIW  +FPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
Sbjct: 1   MIINAKGPASFAEKYIVRSIWENKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW 60

Query: 61  LTIQHGKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLN 120
           L IQHGKPT+VN F ETSGL+IL+T+  L+ E    +V+ LL+ARTN+S I+ R A + N
Sbjct: 61  LKIQHGKPTRVNNFWETSGLNILETIADLNPEGFPVLVDQLLSARTNVSAIYFRGALRNN 120

Query: 121 KESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKT 180
            ++A  ++  +                            H  ED+            A++
Sbjct: 121 PDTAMEVLAQI----------------------------HQLEDT------------AES 140

Query: 181 FNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQLLAVC 240
           F  YDY+L   LAF SGN +Y LI NG K LY RVG YYFS+ +AR+LA+ FY++L  + 
Sbjct: 141 FAEYDYLLHHTLAFSSGNPLYVLILNGFKGLYSRVGRYYFSSSEARQLALNFYKELELLA 200

Query: 241 QSGEREHLPQVIRQYGIASGHIWNQMKMTLPSNFTEDD 278
           ++     +P ++R YGI SG +W Q++  +PS+  + D
Sbjct: 201 KAKNYLDVPALMRTYGINSGKMWLQLRDDMPSSIAQQD 238