Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (515), Expect = 3e-56
 Identities = 147/477 (30%), Positives = 240/477 (50%), Gaps = 28/477 (5%)

Query: 216 AVNQNKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKFTQDIGQKGGVLDQHNEYLQARAA 275
           A++Q+ K +      YRG   QM    +   E +A + + +    G    ++++ Q  AA
Sbjct: 73  ALDQDPKNIA----VYRG---QMDTRDKELSEKIAAYEKLVVTPEGKA-LYDQFKQTFAA 124

Query: 276 LYNNIAN---LANEV--DKAMTILGAFNQTATDDLNQSLAEAGSVYQQG----------- 319
               IA    LA +   D+ + +L    +T  D   + L +   ++ +            
Sbjct: 125 YRTGIAQSFTLAEQGRRDELIKLLLVDMKTVVDGSGKQLNDLAELFSKQVSIESQKSQEH 184

Query: 320 -AIKAVVIGIAVVLLA---TAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNE 375
            A   +V+ + VV  A    A+   +  S+ +P+   L   E++ +G++T+ IE   N+E
Sbjct: 185 YANSRMVVSLFVVFAALATVALAMLLTRSIVKPLGEALNAAENVARGDLTRPIETHGNDE 244

Query: 376 FSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAA 435
            SRL + + ++  NL + L  ++ ++  L   A      +L +   L  Q  +    A A
Sbjct: 245 VSRLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATA 304

Query: 436 MTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDL 495
           +TEM  +V+EVA +A ++    +Q   ++  G+Q +S  +  I  L + +  +   V  L
Sbjct: 305 VTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTGGLVQSL 364

Query: 496 RKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQST 555
              S  IG +LDVIR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT QST
Sbjct: 365 ANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRTQQST 424

Query: 556 SEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHIS 615
            EIE M+  ++S ++ A   +++       ++  A  A  A++ I A + EI   +  I+
Sbjct: 425 QEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHERNLVIA 484

Query: 616 QAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
            AA EQ +    + R++ +I  +S  S     Q + +S  L+ LAN    +V RF++
Sbjct: 485 SAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQRFQV 541