Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  207 bits (528), Expect = 8e-58
 Identities = 128/358 (35%), Positives = 203/358 (56%), Gaps = 3/358 (0%)

Query: 318 QGAIKAVVIGIAVVLLATAI-GYHIAHSVREPVTRILKTLESLT--QGNMTQRIEIRYNN 374
           QG I ++V   AVVLL  A+ G  +A+++  P+  +   L+ +   +G++T+R+ I   +
Sbjct: 202 QGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQD 261

Query: 375 EFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAA 434
           E  +L+   N   D +H ++ ++   +  LT   +     +  ++  +  QR +T  VA 
Sbjct: 262 ELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVAT 321

Query: 435 AMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGD 494
           A+ EM+ + QEVA SAQ +    QQ +   +S +++++ +I  I  L   +  S  ++  
Sbjct: 322 AINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDS 381

Query: 495 LRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQS 554
           L++  + I S+L VIR+IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT QS
Sbjct: 382 LQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQS 441

Query: 555 TSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHI 614
           T EI+ MI  LQS +  A + +    +  + + E+A+ A ++++ +  LI  I+ M+  I
Sbjct: 442 TQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQI 501

Query: 615 SQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           + AA EQ      I RS+  I    D         AQTS +L  L  +  +LV +F++
Sbjct: 502 ASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559