Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  216 bits (549), Expect = 3e-60
 Identities = 150/495 (30%), Positives = 253/495 (51%), Gaps = 32/495 (6%)

Query: 200 ITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLT------TQMPQLK--ERFDEPVAK 251
           +    L    VA    AV  +K A+    Y  RG T       Q P L+  +   + +A+
Sbjct: 150 VEKSLLQGDSVAQFNNAVTLSK-AIQQARYQVRGYTYSGKNEAQQPALEAIDNVLKLLAR 208

Query: 252 FTQDIGQKGGV-LDQHNEYL--------QARAALYNNIANLANEVDKAMTILGA-----F 297
             + + ++  V L Q N+ +        Q R +  +N A L    ++   ++ A      
Sbjct: 209 LPEQLPEEHAVNLQQANDSINVYRAAVSQFRDSQIDNAAALKRMAEQGDVLIDASQKLTV 268

Query: 298 NQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLE 357
           +QTA  DL+   A+A +     A+ A++ G+   L+ T         +  P+ + LK  E
Sbjct: 269 SQTAVRDLDA--AKAKTFLVSAAVLALLFGVIAALVIT-------RQIVGPLGQTLKIAE 319

Query: 358 SLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLS 417
            +  G++T  +     +E  +L R + ++   L  ++  ++     + + A      ++ 
Sbjct: 320 RVAAGDLTHNLTSERRDELGQLQRAMQNMTVGLRQLIGGISEGVTQIASAAEQLSAVTVQ 379

Query: 418 AQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNIST 477
               +NSQ+ +T  VA AM EM  +VQEVA++A+ +       +  +  G +++   I+ 
Sbjct: 380 TSAGVNSQKAETDQVATAMHEMTATVQEVASNAEEASEAAVAADAQAREGDKVVGEAIAQ 439

Query: 478 IRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGF 537
           I +L   +  S  A+G+L++ S +IGS+LDVI+++A+QTNLLALNAAIEAARAGE GRGF
Sbjct: 440 IERLALEVGNSTTAMGELKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGF 499

Query: 538 AVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAM 597
           AVVADEVR LAQRT +ST EIE +I  LQS +   +  +++     + SVE    A +++
Sbjct: 500 AVVADEVRSLAQRTQKSTEEIEELILGLQSGTEQVAATLDNSRSLTDSSVELTRRAGASL 559

Query: 598 EEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLT 657
           E I   +  I  M+  I+ AA +Q+     I RS+ ++  +S+++  +  + A +SA L 
Sbjct: 560 ENITRTVSAIQAMNQQIAAAAEQQSAVAEEINRSVLNVRDVSEQTASSSEETAASSAELA 619

Query: 658 ALANQQSELVHRFKL 672
            L      LV RF++
Sbjct: 620 RLGVHLQTLVGRFRV 634