Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  211 bits (538), Expect = 6e-59
 Identities = 128/380 (33%), Positives = 204/380 (53%), Gaps = 1/380 (0%)

Query: 294 LGAFNQTATDDLNQS-LAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRI 352
           LG      TD++  S L   G    Q  I  +      +LL       I   +  P+   
Sbjct: 261 LGETITRLTDEMYASQLVSLGDESAQSRILQLSCTALAMLLGILAAMIITRQITRPLQDT 320

Query: 353 LKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQ 412
           L  ++ +  G++TQ   +   +E   L + I  +   L D++  +      + + A    
Sbjct: 321 LAVVDRIAAGDLTQGTVVTRGDELGVLQQGIQRMGTTLRDLIGGIRDGVTQIASAAEELS 380

Query: 413 TTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMS 472
             +      +NSQ+ +T  VA AM EM+ +V EVA +A+ +  +  + +  +  G Q+++
Sbjct: 381 AVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQACTVASEADAQARIGDQVVA 440

Query: 473 TNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGE 532
             I  I +L + +  SV+A+ +L + S++IG I+DVIR +AEQTNLLALNAAIEAARAG+
Sbjct: 441 QAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAVAEQTNLLALNAAIEAARAGD 500

Query: 533 QGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASH 592
            GRGFAVVADEVR LAQRT  ST EIES+++ LQ+ +   S ++ +  +  + SVE A  
Sbjct: 501 AGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQVSSIMRNSRELTDSSVELAGK 560

Query: 593 ANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQT 652
           A  ++  I   +  I  M+  I+ AA +Q+     I+RSI ++  +S+++  A  + A +
Sbjct: 561 AGISLGNITQAVSGIQAMNQQIAAAAVQQSSVAEEISRSILNVRDVSEQTASASEETAAS 620

Query: 653 SANLTALANQQSELVHRFKL 672
           S  L  L NQ  +LV  FK+
Sbjct: 621 SIELARLGNQLQQLVSHFKV 640