Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  193 bits (491), Expect = 1e-53
 Identities = 117/322 (36%), Positives = 178/322 (55%)

Query: 349 VTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATA 408
           + R+L+  E  T   +  R+        +RL   I S    L   L +L   ++ L   A
Sbjct: 198 IKRLLRLAEQTTSDPLIARMYTDSRGVQARLEMSILSQEARLKTCLTRLQDTAEHLNDQA 257

Query: 409 STNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGR 468
             + T + ++ + L  QR +T  VA A+ +MA + QEVA+  Q +    Q+    +  GR
Sbjct: 258 RQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTSRGR 317

Query: 469 QIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAA 528
            I       I +L   + E+ + V  L K S +IG ++DVI+ IA+QTNLLALNAAIEAA
Sbjct: 318 DIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAA 377

Query: 529 RAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVE 588
           RAGE GRGFAVVADEVR LAQRT++ST +I ++I+ LQ +++ A + +++  +  E  V 
Sbjct: 378 RAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQTATNAVQTMDAGHRQAEEGVA 437

Query: 589 QASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQ 648
           +   A+ A+  I   +  I+ M+T I+ A  EQ+     I+R+I +I+ ++D++      
Sbjct: 438 RVMEADEALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSGQAHS 497

Query: 649 IAQTSANLTALANQQSELVHRF 670
            A  S  LT  AN Q  LV RF
Sbjct: 498 SALLSEELTRTANTQYSLVERF 519