Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  218 bits (554), Expect = 8e-61
 Identities = 123/359 (34%), Positives = 216/359 (60%), Gaps = 2/359 (0%)

Query: 316 YQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRYN 373
           ++   IKA +IG+A+ L+   +   I  S+  P+   +  + ++  G  ++T+ ++    
Sbjct: 186 FRSQLIKASLIGLAITLVMGLLLTLIVRSIVRPLQETVNAMANIASGESDLTRTLDTHGQ 245

Query: 374 NEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVA 433
           +E ++L+RH N+    L  ++ +L  ++  L  ++S     +  AQ +   Q +Q   VA
Sbjct: 246 DEVTQLARHFNAFTAKLRQVVSQLQESASALGQSSSELGNDAAQAQERSQQQSQQMELVA 305

Query: 434 AAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVG 493
            A+ E+ + VQ+VA +A+++ + ++  E+ ++ G+  +  ++  I +L   + ++VE + 
Sbjct: 306 TAINEVTYGVQDVAKNAEHAASEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIR 365

Query: 494 DLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQ 553
            L   S+QIGS+L+VIR+IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAQRT +
Sbjct: 366 TLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQK 425

Query: 554 STSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTH 613
           ST+EI++MI  LQ+ S  A KVI    +  +L++EQA  A +++  I   +  ++ ++  
Sbjct: 426 STAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNAS 485

Query: 614 ISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           I+ A  +Q      I +++     +S  +  A  Q +Q S+ L AL+ Q + L+ +F++
Sbjct: 486 IASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASSRLKALSEQLNGLLKQFRV 544