Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  206 bits (525), Expect = 2e-57
 Identities = 148/482 (30%), Positives = 249/482 (51%), Gaps = 15/482 (3%)

Query: 197 AEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRGLT--TQMPQLKERFDEPVAKFTQ 254
           AE    D  A+  +  +  + ++N K        Y  +    +   L  +F++   K+ Q
Sbjct: 70  AERSLLDGHANEHIQALSTSHSENAKQAYDRVQKYAAMQPGAEAQALVSQFNDSFGKWMQ 129

Query: 255 DIGQKGGVLDQHNEYLQARAAL-YNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAG 313
            + ++  V++Q     Q  +AL + +   L   +  ++  LG     A+     +  E G
Sbjct: 130 -VSRR--VVEQSVRDPQGASALSFGDSERLFETMRDSIDKLGDLEDAASHREGDAAIENG 186

Query: 314 SVY--QQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIE 369
                QQGAI  ++IG+   +L   +   +   V  P+ R+L  +E + +G  ++  R+E
Sbjct: 187 EAVGVQQGAI--LLIGLFCCVLVLTV---LPLVVLSPMRRLLHRVEQIAEGGGDLKGRLE 241

Query: 370 IRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQT 429
           +R  +E  +L    N   D L  ++ ++   + ++ + A      + +    ++S+    
Sbjct: 242 VRSADELGQLGGAFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAAL 301

Query: 430 SSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESV 489
             V+ A T+M+ +V EVA++A ++    QQ  + S  G +++S+ I +IRQL   +  + 
Sbjct: 302 DQVSTAATQMSAAVHEVAHNAVSASDAAQQASSQSRDGAEVVSSTIESIRQLAQEVESAS 361

Query: 490 EAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQ 549
             +  L + +S IG++L+VIR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA 
Sbjct: 362 GTIEALAQETSSIGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAA 421

Query: 550 RTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISH 609
           RT  ST +I+  I  LQS  + A + ++        SVE+A+  +  +      I  I+ 
Sbjct: 422 RTQDSTKDIQVRIERLQSGVAKAVQAMQVGSSKARDSVERAAGVDEVLSGTSGSIQRIND 481

Query: 610 MSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHR 669
           M+  I+ A  EQ+  T  IAR+I DI  +S+E+    +Q  Q S  L++L+   +EL  R
Sbjct: 482 MAAQIANACEEQSSVTEEIARNISDIRDLSNEAASNSAQSMQASQQLSSLSRNLAELTGR 541

Query: 670 FK 671
           F+
Sbjct: 542 FR 543