Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  211 bits (536), Expect = 9e-59
 Identities = 137/431 (31%), Positives = 231/431 (53%), Gaps = 13/431 (3%)

Query: 250 AKFTQDIGQKGGVLDQHNEYLQARAALYNNIANLAN--------EVDKAMTILGAFNQTA 301
           A+F +   + G  +D   + +   +A +    +LAN           + +T L   N   
Sbjct: 114 AQFEEANNKMGVYIDGLKQVVALDSADHERAVSLANGEQALKAAAYQEKLTALRGHN--- 170

Query: 302 TDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQ 361
            ++   S  +A +VY       +++ IA  LL   +   +  S+ +P++  LK  E +  
Sbjct: 171 AEEAVVSGKDATAVYDHSVNVLMIVLIAAFLLTVVLAIALTRSIVDPISASLKLAEDIAA 230

Query: 362 GNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNK 421
           G++T+++ +  ++E SRL   +N+++ NL   + +++ AS  L+  A    + + SA   
Sbjct: 231 GDLTRQLSVSGSDEASRLMTALNTMSGNLRTTIHEISGASAQLSTAAVEMTSITESADRT 290

Query: 422 LNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQL 481
           L  Q  +    A A+ EM+ +V+EVA +A ++    QQ   +++ G Q ++  ++ ++ L
Sbjct: 291 LQQQNSEIEQAATAVNEMSAAVEEVARNATSTSQAAQQSSLSADLGNQRVNETLTAMQNL 350

Query: 482 ETRLIESVEA-VGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVV 540
            T L+E   A V  L   +  I  +L VIR IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 351 -TGLVEGSSAQVTALAGQAQDISKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVV 409

Query: 541 ADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEI 600
           ADEVR LA RT  ST E+E MIS +Q+ SS   + +    Q++ ++ + A  A  ++ +I
Sbjct: 410 ADEVRALAHRTQTSTQEVEQMISAIQAGSSATVESMHKSTQEVHVTRKTAEDAGESLRQI 469

Query: 601 QALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALA 660
              ++EI++ +  I+ A+ +Q      + RS+  I  ++ +S +   Q    S  L+ LA
Sbjct: 470 TDSVLEINNRNLQIAAASEQQAHVARDVDRSLVSIRDLAVQSSEGTRQTLIASTELSQLA 529

Query: 661 NQQSELVHRFK 671
              ++LV RFK
Sbjct: 530 VNLNDLVLRFK 540