Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  198 bits (504), Expect = 6e-55
 Identities = 129/417 (30%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 260 GGVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLA----EAGSV 315
           G  +D+    LQ   +L  +I+ L  + D+    L   +        + +A     A   
Sbjct: 226 GPAVDEALAALQQYKSLMVSISQLMQQNDQIRDSLRQQSMDIVTSAEKLMAGQVVSANKE 285

Query: 316 YQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNE 375
                 + + + + V+LL       I   +  P+   +     +  G++T  +     +E
Sbjct: 286 KDSAVTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIADGDLTNDLSTTRQDE 345

Query: 376 FSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAA 435
              L   +  +  +L  ++  +++    +   A      S      +  Q+ +   VA A
Sbjct: 346 LGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATA 405

Query: 436 MTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDL 495
           M +MA +VQEVA + +++    +Q    +  G  ++      I QL   + +  EA+  L
Sbjct: 406 MNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRL 465

Query: 496 RKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQST 555
            + S +IG ++DVI+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQRT  ST
Sbjct: 466 IQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSST 525

Query: 556 SEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHIS 615
           +EIE++I +LQ  +  AS+++ +  Q  E +V  A  A  ++ EI   I+ I  MS  IS
Sbjct: 526 TEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQIS 585

Query: 616 QAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
            AA EQ+  T  I RS+  +  I+D+S  A  Q A ++  L  L +   ++V RF++
Sbjct: 586 AAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642