Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (505), Expect = 5e-55
 Identities = 121/356 (33%), Positives = 187/356 (52%)

Query: 317 QQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEF 376
           Q   ++ + + + V+L+     + I   +  P+   +     +  G++T        +E 
Sbjct: 326 QTAVVQLLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDEL 385

Query: 377 SRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAM 436
             L   +  +  +L  ++  + +    +   A      S      +  Q+ +   VA AM
Sbjct: 386 GLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAM 445

Query: 437 TEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLR 496
            EMA +VQEVA + +++    +Q    +  G  ++      I QL   + +  EA+  L 
Sbjct: 446 NEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLT 505

Query: 497 KMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTS 556
           + S +IGS++DVI+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQRT  ST+
Sbjct: 506 EDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTT 565

Query: 557 EIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQ 616
           EIE++I  LQ  +  AS ++++ +Q  E +V  A  A  A+ EI   I  I  MS  IS 
Sbjct: 566 EIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISA 625

Query: 617 AAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           AA +Q+  T  I RS+  +  I+D+S  A  Q A ++  L  L +    +V RFK+
Sbjct: 626 AAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFKI 681