Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (525), Expect = 2e-57
 Identities = 120/360 (33%), Positives = 209/360 (58%), Gaps = 7/360 (1%)

Query: 315 VYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRY 372
           ++  G   A ++ I V+LL T     I  S+  P+   +  + S+  G  ++T+ +E   
Sbjct: 189 LWNAGMFIAGIVLIMVLLLVT-----IVRSIVRPLRAAVGAMASIASGESDLTRTLETHG 243

Query: 373 NNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSV 432
           N+E + L  H N+    L +++ +L  ++  L   ++   + +  AQ++   Q +Q   V
Sbjct: 244 NDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRSEQQSQQMDLV 303

Query: 433 AAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAV 492
           A A+ E+ + VQ+VA +A+++ + ++  E+ ++ G+  +  ++  I  L + + ++V+ +
Sbjct: 304 ATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLSSTIGQAVQVM 363

Query: 493 GDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTT 552
             L   S+QIGS+L+VI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAQRT 
Sbjct: 364 QSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQ 423

Query: 553 QSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMST 612
           +ST+EI+SMI  LQ  S  A KVI    +  +L++EQA+ A  ++  I   +  ++ ++ 
Sbjct: 424 KSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQALRNLNSLNA 483

Query: 613 HISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
            I+ A  +Q      I +++     +S  +  A  Q    S +L  L+ + + L+ +F++
Sbjct: 484 SIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEELNTLLKQFRV 543