Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  193 bits (490), Expect = 2e-53
 Identities = 125/409 (30%), Positives = 217/409 (53%), Gaps = 28/409 (6%)

Query: 271 QARAALYNNIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAV 330
           +A+  +  +IA +    DK   I   F  +  +   + +              + +G++ 
Sbjct: 239 EAQGGITTSIATILGITDKMTAIQNEFRASDAEKAQEKIL-------------LWLGLSA 285

Query: 331 VLLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFS-------RLSRHI 383
            LL     + I  S+  P+   ++ +E + +G+ T + ++  N+E         R++  +
Sbjct: 286 -LLGVLAAWLITRSIVHPLKETVEIVEVVAEGDFTYKTQVTRNDELGALQGSMLRMTSGL 344

Query: 384 NSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSV 443
            SL   + D +V++ SA++ L+A   T QT++      +N+Q+ +T  +A AM +M  + 
Sbjct: 345 RSLIGEMKDGIVQVASAAEQLSAV--TEQTSA-----GVNAQKLETEQIATAMQQMTATT 397

Query: 444 QEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIG 503
            EV+ +A  ++   Q     ++ G Q++    S I  L   +  +  A+  LR  +  IG
Sbjct: 398 HEVSRNAAQAVNTAQIASQLAQKGGQVVDRTRSQIETLAREMNMTRTAMAALRGNTQSIG 457

Query: 504 SILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMIS 563
            +LDVI+ +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  ST EI  +I+
Sbjct: 458 GVLDVIKTVADQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAVRTRTSTDEIALLIN 517

Query: 564 NLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNE 623
            LQ+S+    +V+E  +   + SVE ++ A+  ++ I A + EI  M+  I+ A  +Q+ 
Sbjct: 518 ELQTSTDHMGQVLEQNLALTDSSVELSTQASEVLQSITASVHEIEVMNEQIAVATEQQSN 577

Query: 624 TTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
               I R + ++  ISD++  A  + A +S  L  ++ +  E+ +RFK+
Sbjct: 578 VGEEIGRGVTNVRDISDQTAAASEETATSSVELARVSARLQEMTNRFKV 626