Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  215 bits (548), Expect = 5e-60
 Identities = 156/547 (28%), Positives = 277/547 (50%), Gaps = 36/547 (6%)

Query: 127 QLETRYFSEADLAMDNYQAMFAAQASVQKSTREFQRLHSELSVGMKEFVDDNDSISVKVM 186
           Q+ TR    ++ A+   QA+   +  V KS  + Q    + S  M+EF + +  +  +V 
Sbjct: 135 QIRTRLEQTSEQAL---QAIAQVEVEVLKSVSQEQ----DSSERMEEFTNISQ-LRQQVQ 186

Query: 187 AKSYFIKLKDAEVITSDALASSDVAFVEKAVNQ-NKKAVTHLNYAYRGLTTQMPQLKERF 245
              Y  +++     T DA  S+ +A +++A+ +  + A    N + +GLT     L+  +
Sbjct: 187 TARY--QVQTYTFTTRDADESAAIAAIDEALKEIGQIAQDQGNESLQGLTPATAALQS-Y 243

Query: 246 DEPVAKFTQDIGQKGGVLDQHNEYLQARAALYNNIANLANEVDKAMTILGAFNQTATDDL 305
            E + +F Q               +Q +A     I     E    +  +GA N   T   
Sbjct: 244 RERLGEFKQ---------------IQTKAEADQEIMEGLGET--LLDSVGALNHLQTAQR 286

Query: 306 NQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGNMT 365
           +   A + ++    A  A++IG+    + T         +  P+ + L     + QG+++
Sbjct: 287 DSEAANSSAMLSSVAGLALLIGLLAAWIMT-------RQITVPLQQTLSAAARIAQGDLS 339

Query: 366 QRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQ 425
           + I +   +E  +L   + ++  +L +++  ++     + + A      +      + SQ
Sbjct: 340 RDISVTRRDEMGQLQGSMQTMTVSLRELVGGISEGVSQIASAAEQLSAVTKQTCIGVTSQ 399

Query: 426 REQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRL 485
           +++T  VA AM EMA +VQEVA +AQ +     Q +  + SG +++   I+ I QL   +
Sbjct: 400 KDETDQVATAMNEMAATVQEVARNAQEASQAAAQADQQARSGDEVVGQAITQIEQLAREV 459

Query: 486 IESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 545
           + S +++  L++ S++I  +LDVI+++++QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 460 LNSTQSMSALKQESNKIVGVLDVIKSVSQQTNLLALNAAIEAARAGEAGRGFAVVADEVR 519

Query: 546 VLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALII 605
            LAQRT +ST EIE +I+ LQ+ +   +  ++S     + +VE +  A  A+E+I   + 
Sbjct: 520 GLAQRTQKSTEEIEELIAALQTGTQQVATTLDSSRTLTDNTVELSRRAGGALEQITRTVA 579

Query: 606 EISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSE 665
            I HM+  I+ A+ EQ+     I R++  +  IS+++  A  Q A +S  L  L      
Sbjct: 580 TIQHMNEQIATASEEQSVVAEQINRNVISVRDISEQTAAASEQTAASSVELARLGTHLQT 639

Query: 666 LVHRFKL 672
           LV +F++
Sbjct: 640 LVGKFRV 646