Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  201 bits (510), Expect = 1e-55
 Identities = 121/365 (33%), Positives = 195/365 (53%), Gaps = 2/365 (0%)

Query: 310 AEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQR 367
           AE  ++  + A+K +   + + L    +   +A SV +P+  + +    + +G  ++ QR
Sbjct: 272 AEVFALLDEAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQR 331

Query: 368 IEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQRE 427
           + ++  +E ++L+   NS    + D ++++   S+ L  +A      +         Q++
Sbjct: 332 LPVQGEDELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKD 391

Query: 428 QTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIE 487
           +T  V  A+ EM  +V E+A +A  +    +  + AS SG+++++    TI QL   + +
Sbjct: 392 RTMQVVTAINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQ 451

Query: 488 SVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVL 547
             E +  L   +  IGSILDVIR I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 452 VGEVIESLATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 511

Query: 548 AQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEI 607
           A RT  ST E++ MI  LQS S+ A   +       +  V     A++ +  I   I  I
Sbjct: 512 ASRTAASTDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLI 571

Query: 608 SHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELV 667
           S M+  ++ A  EQ+     I R++ +IN I+  +       A+ S +L ALA +  +LV
Sbjct: 572 SDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLNALATRLDQLV 631

Query: 668 HRFKL 672
            RFK+
Sbjct: 632 ARFKV 636