Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  229 bits (585), Expect = 2e-64
 Identities = 180/691 (26%), Positives = 315/691 (45%), Gaps = 46/691 (6%)

Query: 10  MQGSVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPLVSLSNQTSVQLL 69
           M+  V  R+  GF+ + ++ V+     L   N +  +   +   ++P +  +   S  L 
Sbjct: 1   MKIKVATRVIGGFSFVTLLLVILGGASLVTNNNLKDSTAIMQELSMPALEATGHLSETLS 60

Query: 70  SADKSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQLE 129
              +       ++++S + G+ + F Q    F +    LS    N       ++ L    
Sbjct: 61  EQQRLILKAFHSKNSSTVPGLERTFDQLSSGFNNQFTLLSGLLNNRDNFQGQLSGLS--- 117

Query: 130 TRYFSEADLAMDNYQAMFAAQASVQKSTREFQRLHSEL-------SVGMKEFVD---DND 179
               S   +   N +AM  A+        E  +L  +L       S  + + +D     +
Sbjct: 118 ----SSYQVLESNSKAMLKARFDSLSQQEELLKLREKLENSADDASSNLFDLIDLESSQN 173

Query: 180 SISVKVMAKSYFIKLKDAEVITS--DALASSDVAFVEKAVNQNKKAVTHLNYAYRGLTTQ 237
               ++ A +  I      +IT+  D +A+ + +  E    +       L+Y    + T+
Sbjct: 174 QTEREIAAAAGAIDTTMTGIITTVYDLVAAEERSKYELISKE-------LDYMLGEVKTK 226

Query: 238 MPQLKER----FDEPVAKFTQDIGQKGGVLDQHNEYLQARAALYNNIANLANE------- 286
           M  +        D  +     D   K   + +  + L    +   +   L +E       
Sbjct: 227 MEYISRHGEGIIDADLVSTLNDDSTKVLKMLEGKDTLVTLKSRQIDSTQLTSEKLTLVEK 286

Query: 287 ----VDKAMTILGAFNQTATDDL-NQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHI 341
               V + M  L    +T T+D+ NQ+L +  S     +++ +++ +  +++A  I + +
Sbjct: 287 NALTVTEQMKRLAKDIETVTNDISNQALNDINSA----SLRTLILVVIAIVVAVVISFAV 342

Query: 342 AHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSAS 401
              ++  +  +   L  L  G++T +++   ++EF+ LSR+ N L D+L  ++  +   S
Sbjct: 343 VRPLKRSLDEVNGALNVLASGDLTHKLDDTGHDEFAELSRNCNRLVDSLRSLIASILDRS 402

Query: 402 DDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVE 461
           + L A A      +      +  Q+ Q   VA A TE++ S  +V  SA ++L+ ++Q +
Sbjct: 403 NQLAAAAEETSAITSQTTIGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQAD 462

Query: 462 TASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLAL 521
             ++  R I   N  TI  L   + ++ + +  +   S+ IGSILDVIR IAEQTNLLAL
Sbjct: 463 EETQHMRTIADENKRTILSLADEVAKASKVINKVHSDSASIGSILDVIRGIAEQTNLLAL 522

Query: 522 NAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQ 581
           NAAIEAARAGEQGRGFAVVADEVR LA RT  ST EI+ MI  LQ  +  A  V++    
Sbjct: 523 NAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQN 582

Query: 582 DMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDE 641
             +  VE+   AN A++ I   + +     THI+QAA EQN  +  ++  +E I  IS+E
Sbjct: 583 QAQSCVEKTEQANQALQTISHSVHKAYDAGTHIAQAAQEQNLVSQQVSEKLEHIAAISEE 642

Query: 642 SYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           +     Q A++S  +  LA +    V  F++
Sbjct: 643 TALGAEQTAKSSHEVARLAEELQSSVKEFRV 673