Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  197 bits (502), Expect = 9e-55
 Identities = 162/627 (25%), Positives = 286/627 (45%), Gaps = 53/627 (8%)

Query: 58  VSLSNQTSVQL----LSADKSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELSQASV 113
           ++L+ QT V+L    L   K  KDFLT  D + + G  Q  A+ K +  +V     +  +
Sbjct: 35  LALAAQTVVELERDMLELRKDEKDFLTRSDMAYVQGHAQHAAELKTKLSTVKQVFEKYDM 94

Query: 114 NHPELAQPITELKQLETRYFSEADLAMDNYQAMFAAQASVQKSTREFQRLHSELSVGMKE 173
                  P+  L + E+         +  Y  +F+   ++Q+      +  S L   ++E
Sbjct: 95  -------PMAPLDRFES--------LLGQYLTLFSDVVTLQQQIGLTPK--SGLYGQLRE 137

Query: 174 FVDDNDSISVKVMAKSYFIKLKDAEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAYRG 233
            V + +++  +       +++        D +   D  +++K                  
Sbjct: 138 AVHNVETLLKEHNKPELAVQMLQLRRNEKDFMLRRDAGYLDK------------------ 179

Query: 234 LTTQMPQLKERFDEPV--AKFTQDIGQKGGVLDQHNEYLQARAALYNNIAN--LANEVDK 289
                 Q    FD  +  +  + D+  +  +     +Y     AL N      L  E  K
Sbjct: 180 ----FQQTLRSFDSTLDGSDLSPDVADE--IRRLMKDYQMNFEALVNKEKEFGLGKEDGK 233

Query: 290 AMTILGAFNQT--ATDDLNQ-SLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVR 346
              +    +Q+  AT +L + +L E           A  +   + +L   + + I  ++ 
Sbjct: 234 MGALRSVIDQSEQATQELRELALHEIHDEEGDSVAMATTLFAVIAVLVAIVTFMIIRAII 293

Query: 347 EPVTRILKTLESLTQG-NMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLT 405
            P+  I + +  + +  N+T R + +  +E + + +H N + ++   ++ ++N A + + 
Sbjct: 294 TPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMN 353

Query: 406 ATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASE 465
            +       +  A + +  Q  +T  VA A+TEM  ++ E+A + + +        T ++
Sbjct: 354 ESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQ 413

Query: 466 SGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAI 525
            G+Q +   I  I+ L  +L  S   V +L + S  IGS+LDVIR IAEQTNLLALNAAI
Sbjct: 414 VGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAI 473

Query: 526 EAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMEL 585
           EAARAGEQGRGFAVVADEVR LA RT +ST EI  +I  LQS +    +++E+  +    
Sbjct: 474 EAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGE 533

Query: 586 SVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQA 645
           S EQA+ A + + +I   +  I  MST I+ A  EQ+     + +++  I  I++ES  A
Sbjct: 534 SAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHA 593

Query: 646 MSQIAQTSANLTALANQQSELVHRFKL 672
               A+ S ++   A      V +F++
Sbjct: 594 AMANAKASDDVRERAEYLQRAVSQFRV 620