Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (546), Expect = 6e-60
 Identities = 147/455 (32%), Positives = 242/455 (53%), Gaps = 12/455 (2%)

Query: 220 NKKAVTHLNYAYRGLTTQMPQLKERFDEPVAKFTQDI-GQKGGVLDQHNEYLQARAALYN 278
           +K   T L    + L +Q  QL    ++ +      + G+ G V  Q +  +     LY 
Sbjct: 97  DKYMSTELTADEQKLASQTQQLFAPANQQIQLLIDKLSGKSGSVTGQFSADI---IPLYQ 153

Query: 279 NIANLANEVDKAMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIG 338
            I  ++ +V + +T+     Q    DL +   E  +++       + + +  VL+ +  G
Sbjct: 154 VIDPISGKVAELVTL-----QIHIADLEREQVE--TLHSSSLKWFIGLAVFAVLITSFFG 206

Query: 339 YHIAHSVREPVTRILKTLESLTQ-GNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKL 397
             +   V  PVT I + L  + +  +MT    +  ++E   +++ +N + ++L  IL  +
Sbjct: 207 VWVNRGVMTPVTEIRQKLRQIREKSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNI 266

Query: 398 NSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMV 457
             A+  L  +A      +  A +++  Q+ +T   A AM EM  +V EVA S+ ++    
Sbjct: 267 AEAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESA 326

Query: 458 QQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTN 517
           +  + ++  G  I+  +IS++  L +++  +   +G+L   S  IG +LDVI++IAEQTN
Sbjct: 327 RNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTN 386

Query: 518 LLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIE 577
           LLALNAAIEAARAGEQGRGFAVVADEVR LAQRT++ST EIESMI +LQ     A   +E
Sbjct: 387 LLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSME 446

Query: 578 SCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINH 637
             +  ++ + E  + A SA+++I A +  I+ ++THI+ AA EQ+    SI +SI  I+ 
Sbjct: 447 QGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISD 506

Query: 638 ISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           I+ ES QA + +++    L  LA      V  F L
Sbjct: 507 IAQESTQAANDLSEAVHQLAQLAGHMRTQVGTFIL 541