Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (514), Expect = 4e-56
 Identities = 120/352 (34%), Positives = 201/352 (57%), Gaps = 2/352 (0%)

Query: 323 AVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLT--QGNMTQRIEIRYNNEFSRLS 380
           A ++ + ++LL     + +   +R  +  +L  ++++   +G++++RI+I+  +E   ++
Sbjct: 314 ACLMSLGIILLVGVTVWLLLLPLRRQLESLLGAMDNMASGEGDLSRRIDIQREDELGLMA 373

Query: 381 RHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMA 440
              N  A  +  +L +    + D+       +     A   ++ Q+ Q  SVAAA  EMA
Sbjct: 374 DAFNRFAAKVQQMLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDSVAAAAIEMA 433

Query: 441 HSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSS 500
           H+ QE+A SAQ +    +  +T ++ G+QI++   S I  L +R+IE+   + +LR  S 
Sbjct: 434 HTSQEMAASAQRTADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAVIKELRGSSE 493

Query: 501 QIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIES 560
           +IG +L VIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  ST+ I+ 
Sbjct: 494 KIGEVLSVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQG 553

Query: 561 MISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGE 620
           +I  LQ S+  A  V+E+ + D +      S    ++ +I   I  I   +T I+ A G+
Sbjct: 554 IIQRLQQSAMEAESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQTTEITVAIGQ 613

Query: 621 QNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           Q      +A+++E++  +SD+S+ A  ++A +      L +  S  + +F++
Sbjct: 614 QAVVADEVAQNVENVRGLSDDSHSASQELAVSLKAFEQLTHALSGNISQFRV 665