Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (505), Expect = 4e-55
 Identities = 116/334 (34%), Positives = 191/334 (57%), Gaps = 2/334 (0%)

Query: 341 IAHSVREPVTRILKTLESLTQG--NMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLN 398
           I+ SV EP+ R L   +++ +G  N+T R+E R  +E S++S + N+    +  +++ + 
Sbjct: 221 ISRSVTEPLQRTLMAFKNIAEGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVR 280

Query: 399 SASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQ 458
            + D     +S+    +  A +  NS +++T SVAAA+ +M+ +  EVA +AQ +    +
Sbjct: 281 DSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAK 340

Query: 459 QVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNL 518
             ++ ++S   +++  +  +RQL + L E+ E    L+  S +IG ILDVI  IAEQTNL
Sbjct: 341 NADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNL 400

Query: 519 LALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIES 578
           LALNAAIEAARAGE GRGFAVVADEVR LA RT QST EI ++I  ++ +    +  +  
Sbjct: 401 LALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVAR 460

Query: 579 CMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHI 638
             Q  + +V++ +    A+  I+  I +I+ M+  I+ A  EQ+     +  +I  IN I
Sbjct: 461 ARQQSDNTVDETAQVMDALGLIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEI 520

Query: 639 SDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           S E+      +  TS  +   + Q ++L+  FK+
Sbjct: 521 SVENLSKSETVGHTSDRIAEDSRQMAQLIAVFKV 554