Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  200 bits (509), Expect = 1e-55
 Identities = 125/403 (31%), Positives = 216/403 (53%), Gaps = 15/403 (3%)

Query: 285 NEVDKAMTILGAFN-----------QTATDDLNQSLAE---AGSVYQQGAIKAVVIGIAV 330
           N+VD+A T L   N           +   +  N+ + E   A    +  A+  ++ GI +
Sbjct: 138 NQVDEARTQLNTTNNEVFRQARELIRVMIESNNRQIKEGAVAADELRNSALTWMISGIVL 197

Query: 331 V-LLATAIGYHIAHSVREPVTRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADN 389
             ++A  +G  I   +  P+ + +++ + + +G++TQ I     +E  +L   ++ +   
Sbjct: 198 AFIIALTVGVLITRLITRPIAQAVQSAQRIAKGDLTQAITTERTDEAGQLLVALSDMQGG 257

Query: 390 LHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANS 449
           L   LV++ +ASD L + A      +  +   L  Q ++    A A+ +M  +V EVA++
Sbjct: 258 LKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASN 317

Query: 450 AQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVI 509
           A ++    +Q  T +E GRQ +   +S +  +   + +S ++V DL     +IG ++DVI
Sbjct: 318 AVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVIDVI 377

Query: 510 RNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSS 569
           R+IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  ST +IE MI  +Q+ +
Sbjct: 378 RSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQTSTVDIEKMIGEVQTGA 437

Query: 570 SLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIA 629
             A   +   +     +   A +A  A++ I A + +I+  +  I+ A+ EQ +    + 
Sbjct: 438 DGAVAAMNKSLNWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQAQVAREVD 497

Query: 630 RSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           R++ +I  +S ++     Q + +S +L+ LA   + LV +F+L
Sbjct: 498 RNLLNIQDLSTQTAAGAHQTSASSQDLSRLATSFNVLVSKFQL 540