Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (511), Expect = 9e-56
 Identities = 116/365 (31%), Positives = 201/365 (55%), Gaps = 2/365 (0%)

Query: 310 AEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQR 367
           AE  ++ ++ A + +V  + +      +   ++ SV +P+ ++   L+ + QG  ++ QR
Sbjct: 274 AEVFALLEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQR 333

Query: 368 IEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQRE 427
           + +  N+E ++L++  NS  + +   ++++   S  L+  A      +   Q+    Q++
Sbjct: 334 LPVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKD 393

Query: 428 QTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIE 487
           QT  V  A+ EM  +V E+A +A  +    +  + AS +G+ +++    TI QL   + +
Sbjct: 394 QTMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQ 453

Query: 488 SVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVL 547
               +  L   ++ IGSILDVIR +++QTNLLALNAAIEAARAGE GRGFAVVA+EVR L
Sbjct: 454 VGNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNL 513

Query: 548 AQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEI 607
           A RT  ST E++ MI NLQS ++ A + +       +  V+    A+  + EI   I  I
Sbjct: 514 ASRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAI 573

Query: 608 SHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELV 667
           + M+  ++ A  EQ+     I R++ +I+ I+  + +    +AQ S +L  LA++   LV
Sbjct: 574 TDMNIQVAAATEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLDTLV 633

Query: 668 HRFKL 672
             FK+
Sbjct: 634 AGFKV 638