Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  207 bits (526), Expect = 1e-57
 Identities = 124/357 (34%), Positives = 203/357 (56%), Gaps = 7/357 (1%)

Query: 319 GAIKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGN--MTQRIEIRYNNEF 376
           G++   ++ +A+++L   I   +  S+  P+   +  +  +  G+  +T+R+++   +E 
Sbjct: 212 GSVSTSLVALALIVLLALI---VVRSIIRPLKSAVSAMNDIASGDGDLTRRLDVSGKDEL 268

Query: 377 SRLSRHINSLADNLHDILVKLNSASDDLT-ATASTNQTTSLSAQNKLNSQREQTSSVAAA 435
            +L+   NS AD +H ++ ++ S++  L  ATA  NQ  +  A+  +  Q+ ++  VA A
Sbjct: 269 GQLATAFNSFADQVHGLVERVLSSTRTLNEATADLNQVMT-EAEQGVERQKSESDQVATA 327

Query: 436 MTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDL 495
           M EM  + QEVA++A  +              + ++      I  L  ++ E V  +  L
Sbjct: 328 MNEMTAAAQEVASNASEASTAADHANGQVCDAQGLVHQATEVIGGLSEQVGEGVRVIEQL 387

Query: 496 RKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQST 555
              S +I S+L+VIR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT QST
Sbjct: 388 GTDSRRIDSVLEVIREIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLARRTQQST 447

Query: 556 SEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHIS 615
            EI+ MI  LQS +  A KVI S  +  E +VE+    N A++ I   +  I+ M+T I+
Sbjct: 448 QEIQDMIERLQSGAGNAVKVIASISERSEATVEETRQVNDALQRIGQAVATITDMNTQIA 507

Query: 616 QAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
            AA EQ   + +I +++ +I  I++++ Q   +    +  L  LA++ SE V R+++
Sbjct: 508 SAAEEQTSVSETINQNVHEIVAITEQTAQGTRRAGNATQRLKNLASEMSEQVSRYRV 564



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 12  GSVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPL---VSLSNQTSV-Q 67
           GSV   + A  ALI+++ ++ V  ++R +    S    +++    L   + +S +  + Q
Sbjct: 212 GSVSTSLVA-LALIVLLALIVVRSIIRPLKSAVSAMNDIASGDGDLTRRLDVSGKDELGQ 270

Query: 68  LLSADKSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELSQASVNHPELAQPITELKQ 127
           L +A  SF D         + G+ +    S +      A+L+Q           +TE +Q
Sbjct: 271 LATAFNSFAD--------QVHGLVERVLSSTRTLNEATADLNQV----------MTEAEQ 312

Query: 128 LETRYFSEADLAMDNYQAMFAAQASVQKSTRE 159
              R  SE+D        M AA   V  +  E
Sbjct: 313 GVERQKSESDQVATAMNEMTAAAQEVASNASE 344