Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (562), Expect = 1e-61
 Identities = 127/353 (35%), Positives = 201/353 (56%), Gaps = 2/353 (0%)

Query: 322 KAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRYNNEFSRL 379
           K ++IG    L+ TAI + IA S+  P+      L  + +G  ++T+RIE++  +E ++L
Sbjct: 282 KLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQL 341

Query: 380 SRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEM 439
           +   N  A+ +H  + +++ ++  L  +A      +   Q     Q  +T  VA AM EM
Sbjct: 342 ALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEM 401

Query: 440 AHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMS 499
           A +VQEVA++A ++         ++E G+ ++   ISTI  L   +  + +A+ +L + +
Sbjct: 402 AATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNT 461

Query: 500 SQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIE 559
           +QI S+L VIRNIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  STSEI+
Sbjct: 462 AQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQ 521

Query: 560 SMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAG 619
            MI  LQ S+      + +     +  V     A  A+E I   +  IS M+  I+ AA 
Sbjct: 522 QMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAAN 581

Query: 620 EQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           EQ   +  I +++ +IN I+  + ++  Q A+    L  L+ + + L+ +F++
Sbjct: 582 EQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634