Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  231 bits (590), Expect = 6e-65
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 2/354 (0%)

Query: 321 IKAVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQG--NMTQRIEIRYNNEFSR 378
           +K ++IG+  +L+ TAI + IA S+  P+      L  + +G  ++T+RIE++  +E ++
Sbjct: 281 LKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMAQ 340

Query: 379 LSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTE 438
           L++  N  A+ +H  + +++ ++  L  +A      +   Q   N Q  +T  VA AM E
Sbjct: 341 LAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMNE 400

Query: 439 MAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKM 498
           MA +VQEVA++A ++         ++E G+ ++   ISTI  L   + ++  A+ +L + 
Sbjct: 401 MAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAANAINELERN 460

Query: 499 SSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEI 558
           ++QI S+L VIRNIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  ST+EI
Sbjct: 461 TTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEI 520

Query: 559 ESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAA 618
           + MI  LQ S+      + +     +  V     A SA+E I   +  IS M+  I+ AA
Sbjct: 521 QQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAA 580

Query: 619 GEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
            EQ   +  I +++ +IN I+  + ++  Q A+    L  L+ + + L+ +FK+
Sbjct: 581 NEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQFKI 634