Pairwise Alignments

Query, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  207 bits (527), Expect = 1e-57
 Identities = 117/353 (33%), Positives = 203/353 (57%), Gaps = 4/353 (1%)

Query: 323 AVVIGIAVVLLATAIGYHIAHSVREPVTRILKTLESLTQGN--MTQRIEIRYNNEFSRLS 380
           A  + + ++LL     + +    R  ++++L  +E + +G+  ++QRI +   +E  +L 
Sbjct: 316 ACFVALGIMLLVGITVWLMLLPFRRQLSKLLDAMEDIAEGDSDLSQRILMEREDELGKLG 375

Query: 381 RHINSLADNLHDILVKLNSASDDL-TATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEM 439
              N  A+ +  +L+   + + ++ T      Q   L A + ++SQ++Q  SVA A T+M
Sbjct: 376 DAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDL-AVSSVSSQKQQIDSVATAATQM 434

Query: 440 AHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMS 499
           A + QE+A SAQ +    ++ +T +  G QI+S     ++ L  ++IE+ + + +LR  S
Sbjct: 435 AQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKELRSSS 494

Query: 500 SQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIE 559
            QIG +L VIRNIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  ST+ I+
Sbjct: 495 EQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQ 554

Query: 560 SMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAG 619
            +I  LQ S+  A +V+ES ++   +  +  +    A+ +I + I+ I   +  I+ A G
Sbjct: 555 GIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIASAIVSIQQQTVEITVAIG 614

Query: 620 EQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672
           +Q      +A+++  +  +SD+S  +   ++Q+        ++ +  + +FK+
Sbjct: 615 QQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667