Pairwise Alignments

Query, 472 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  133 bits (334), Expect = 1e-35
 Identities = 106/430 (24%), Positives = 189/430 (43%), Gaps = 38/430 (8%)

Query: 14  RPIRSLTLTSL-LLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQATQLLPDYVAGEV 72
           R + S+ L ++ LL+GC+       F +Y ++ +   Q +A+G    A  LL      + 
Sbjct: 6   RAVFSIALGAITLLSGCS------AFRNYDSELAQTNQQLASGNVDAALTLLEKNNTSQD 59

Query: 73  LDNL---EKGRVYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSVGSLAVNDNL 129
            D L   EKG +       + SQ +  +AD  V Q +D   +  +      GS  VND +
Sbjct: 60  KDLLYYFEKGELLRAKGDLSGSQTAWNSADQQVGQWEDAVKLDTAKYLAQFGSFLVNDKV 119

Query: 130 NEYEPADYELGFLHLYLGLNYVRNNDLDGALVEMRRANQVQEAAKKRREQALSSAEQEMR 189
             YE  DYE   L   + LN +  ND DGA  ++++ ++ +      R++     E+E  
Sbjct: 120 RRYEGYDYEKVMLTTQMALNLLAVNDFDGARTQIKKTHEREAVIADLRDKEYLKREEEAE 179

Query: 190 SQGLSPNLGSVLAQYP----DAGKTL---QAVQNGYLLYLSALLYEADNDLNSAYVDYRR 242
            QG+       L  YP    DA + +    + Q+ +  YL+  +YEA  + + A   YR+
Sbjct: 180 KQGIKTEYKD-LQGYPVASLDAPEVVSLKNSYQSAFSHYLAGFVYEALGEKDLAAPGYRK 238

Query: 243 ALAVAPNNPSVIDGTLRVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQPK 302
           A  + PN P +++  LR   +   + D                    ++++ + G+   +
Sbjct: 239 AAELRPNTP-LLEQALRDLDKPAAKSD-----------------DSDILIVVQSGLAPSR 280

Query: 303 QAWRLSLPLSDSRGNTALYSLALPYYSSSVAQSRV-PISLNGASLASMPVTDVDLMAKQA 361
            + R+ LPL  S GN  +  L+ P      + +    I ++G  L    +     M+++A
Sbjct: 281 DSIRIPLPLPIS-GNLVITPLSFPLIKPDTSTATFGQIGVDGRQLDLTQLNSTTAMSRRA 339

Query: 362 LTEQMPALVLRQALRVVAKDQLRKETTQEEDVANLVFNIWNTLTEQPDTRSWLTLPATVN 421
           L + MP ++LR  +R V +   +K+      +A L   + + + E  DTR+W TLP    
Sbjct: 340 LRDDMPGIILRTTVRAVTRGVAQKQINDTNPLAGLAVGLTSAVLEGADTRTWRTLPDYTQ 399

Query: 422 TATQVVKAGD 431
                +K G+
Sbjct: 400 VVRLRLKKGE 409