Pairwise Alignments

Query, 472 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., TPR domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 1e-56
 Identities = 142/456 (31%), Positives = 231/456 (50%), Gaps = 25/456 (5%)

Query: 21  LTSLLLAGCANLTAGNLFSHYSAQNSDLYQSVAAGQYQQATQLLPDYVAGE--VLDNLEK 78
           +T+L L GCA    G  F  Y AQ + + Q+++          +   ++G+  +L   E 
Sbjct: 9   MTALFLGGCA---MGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLLYAQEA 65

Query: 79  GRVYFLSQQYAESQQSLAAADLAVKQQQDRAIISVSSTATSVGSLAVNDNLNEYEPADYE 138
           GRV  +   +  SQ    +A  A  +  D+A +S+S+   + GSL +NDN+  Y    +E
Sbjct: 66  GRVAQIGGDFKASQDYYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYRGPGFE 125

Query: 139 LGFLHLYLGLNYVRNNDLDGALVEMRRANQVQEAAKKRREQALSSAEQEMRSQGLSPNLG 198
              LH Y  LNY+   D +GALVE+RRAN++Q   +KR E++  S  + M +  +   + 
Sbjct: 126 RVMLHQYQALNYLIQYDFEGALVEVRRANELQAQEQKRYEKSKESV-KAMANGTVDSEIN 184

Query: 199 SVLAQYPDAGKTLQAVQNGYLLYLSALLYEADNDLNSAYVDYRRALAVAPNNPSVIDGTL 258
            +  Q   AG+   +  N Y  Y + L++E   + N A++DYR+A  + P NP +    +
Sbjct: 185 RLEQQ---AGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDLV 241

Query: 259 RVASRLGMQQDLKLLKQQYGEPKRLTSAQGRVIVIEEQGIVQPKQAWRLSLPLSDSRGNT 318
           R+A +L M Q  +  K ++G+        G+++++ E+  V  KQ   L++P + S GN 
Sbjct: 242 RLAKKLAMPQ-YEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQP--LTVPFTIS-GN- 296

Query: 319 ALYSLALPYYSSSVAQSRVPISLNGASLASMP--VTDVDLMAKQALTEQMPALVLRQALR 376
              +++LP Y SS   +  P+SL G      P  +T++D +A  AL E +PAL++RQA R
Sbjct: 297 -WQTVSLPTYGSS-GPAPQPLSLMGLDTPLQPATITNIDALAINALKEDLPALLIRQAAR 354

Query: 377 VVAKDQL-------RKETTQEEDVANLVFNIWNTLTEQPDTRSWLTLPATVNTATQVVKA 429
           V AK +L        K+   E D A +   I+N L+EQ D RSWLTLP       + +  
Sbjct: 355 VYAKSELTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLTLPKQAQIGRRFLPE 414

Query: 430 GDQVLDIAGTHYTFHVPENGTVLVWLSHQGNNVTIW 465
           GD  + +        +    T LVW    G+N+  +
Sbjct: 415 GDYSVTLGNASRNIEIRPGQTTLVWAIDTGSNIRFY 450