Pairwise Alignments

Query, 429 a.a., NAD(P)/FAD-dependent oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., NADH dehydrogenase (ubiquinone) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  135 bits (339), Expect = 3e-36
 Identities = 107/373 (28%), Positives = 165/373 (44%), Gaps = 26/373 (6%)

Query: 3   RIIVVGGGAGGLELVTKLGRTLGRKGRANVTLVDRNSSHLWKPLLHEVATGSLDEGVDAL 62
           R+++VGGG GGL       R L R GR +V LVDRN+ H + PLL++VA   ++    A 
Sbjct: 18  RVVIVGGGFGGLWAA----RRLARSGRVDVVLVDRNNYHTFLPLLYQVAAAEIEPEQIAY 73

Query: 63  SYRAHAKNHS-FDFQLGSLASIDRESKTITLSELKDEHGELLMPKRDLEYDILVLAIGST 121
             R   +        L  +  +D   + +                 D+ YD L+LA GS 
Sbjct: 74  PLRGVFRGQQRVSVALADVRGVDTARRVLHTDG------------PDIPYDHLILAPGSL 121

Query: 122 SNDFNTPGVKEHCIFLDSPEQANRFRTEMNNEFLKLHAKNGQGS----VDIAIVGAGATG 177
           ++ F  PG  E+   L S E A R R  +   F +             +   +VG G TG
Sbjct: 122 TSFFGVPGATENAYTLKSLEDAVRLRNHILACFERASLTEDPARRAALLTFTVVGGGPTG 181

Query: 178 VELSAELHNAVKELRTYGFGDL-DSSKLNVNLIEAGERILPALPPRISAAAHQELTKLGV 236
           VE +  L   V+      F +L   +   + L+EA + +L   P ++   A   L  +GV
Sbjct: 182 VEFAGALAELVRTPLARDFPELAGKTPPRIVLLEAADGLLTGFPEQLRTYARDRLALMGV 241

Query: 237 NVRTMTMVTKAEKDGLTTKDGEKISAHIMVWAAGIKAPDFMKDIAGLETNRINQLVVKGT 296
            VRT   V +     +   DG +I+   + W AG++  D +    GL   R  ++ V  T
Sbjct: 242 EVRTRAGVAEVGPTDVRLGDGLRIATCTVAWTAGVRGHD-VAAAMGLPVGRGGRVPVLPT 300

Query: 297 LQTTRDDDIFVIGDLAQCTQADGKFVPPRAQAAHQMASLAFRNIVAKMYGRELKAYVYKD 356
           LQ     +I V+GDLA     DG+  P  A  A Q    A  N++  + G   K + Y+D
Sbjct: 301 LQVDGHPEIQVVGDLA---LPDGQNPPMIAPNATQQGRHAAANVLRLLKGGTAKPFRYRD 357

Query: 357 HGSLVSLSRFSTV 369
            G++ ++ R + V
Sbjct: 358 KGAMATIGRQAAV 370