Pairwise Alignments

Query, 429 a.a., NAD(P)/FAD-dependent oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  376 bits (966), Expect = e-109
 Identities = 193/427 (45%), Positives = 273/427 (63%), Gaps = 2/427 (0%)

Query: 3   RIIVVGGGAGGLELVTKLGRTLGRKGRANVTLVDRNSSHLWKPLLHEVATGSLDEGVDAL 62
           RI++VGGGA GL L +KLGR LG     +V L+D++  H+WKP LHEVA G +D+ ++ L
Sbjct: 5   RIVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVAVGVIDQSIEGL 64

Query: 63  SYRAHAKNHSFDFQLGSLASIDRESKTITLSELKDEHGELLMPKRDLEYDILVLAIGSTS 122
            YR H   + + +  G +   D ++KTI L+ +  + GELL+  R +EYD LVLA+G  S
Sbjct: 65  LYRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALGGVS 124

Query: 123 NDFNTPGVKEHCIFLDSPEQANRFRTEMNNEFLKLHAKNGQGSVDIAIVGAGATGVELSA 182
           N FNT G ++HCIFLDS + AN F  ++ +  L+L+    Q  V I IVGAGATGVEL+A
Sbjct: 125 NSFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQLNET--QEKVSIGIVGAGATGVELAA 182

Query: 183 ELHNAVKELRTYGFGDLDSSKLNVNLIEAGERILPALPPRISAAAHQELTKLGVNVRTMT 242
           ELH+ ++ ++ YG+ ++    L+V+LIEA  +ILP LP R+SA A   L K+G+ +    
Sbjct: 183 ELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIGIRLHIGV 242

Query: 243 MVTKAEKDGLTTKDGEKISAHIMVWAAGIKAPDFMKDIAGLETNRINQLVVKGTLQTTRD 302
            V +  +DG  T+DG+ I A + VWAAG+K P   ++ + L     NQ+ V   ++    
Sbjct: 243 QVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDACMRVKGQ 302

Query: 303 DDIFVIGDLAQCTQADGKFVPPRAQAAHQMASLAFRNIVAKMYGRELKAYVYKDHGSLVS 362
            DI+ IGD A      G+ VPPRAQAA QMA   + NIV ++ G+  K +VYKD+GSLVS
Sbjct: 303 QDIYAIGDCALLILDSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEKPFVYKDYGSLVS 362

Query: 363 LSRFSTVGSLMGNLTRGSMMVEGRIARVVYISLYRMHQMALHGMIKTGLMMLVGRINRVL 422
           LSRFS VG+LMGNL  G+  VEG IAR++YISLY+ H  +L+G     +  +  ++ +  
Sbjct: 363 LSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAIIYRIAQKLLKWQ 422

Query: 423 RPNLKLH 429
           RP LKLH
Sbjct: 423 RPKLKLH 429