Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 90.1 bits (222), Expect = 5e-23
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 42/202 (20%)

Query: 79  GVTLLPSSAYQLNSEAQKLRNHAGFNVLLHTAWRQNDQGRQSAPVFHIQAGRDFSGQFQA 138
           G  LL  S  Q       L+  AG   LLH  W+Q+   R  A    +  G DFS +F  
Sbjct: 122 GTVLLADSQSQFGEMITTLKREAGHKSLLHMTWQQSMLPRHLAKPVRLYGGEDFSDRFNE 181

Query: 139 NGSPVGSTVTAPVDGVSEMSI--------ANPLYELDGTLQIYVQHFLFAEAVLDLKKPS 190
           +G  V +   +   G+ + +         A P++ LDGTL IY+ H+L+ E  L L +  
Sbjct: 182 DGYAVNAAPQSDTSGIPQFNFDLNFEEKQAPPIWALDGTLNIYLNHYLYVETALTLHRAG 241

Query: 191 VREVVLQDSPLELGTNEEQGATVQAGMLESVSPKVQEET------FLKSYRLDQKRRMRS 244
                                           P++++ET      +L +  + Q +R++S
Sbjct: 242 ----------------------------SKAQPQLEDETVMSQVPYLYNIYMTQNKRVKS 273

Query: 245 GETHYLDHPLMGVIIQVRRVAE 266
            E HY DHP MG+I+Q+R++ +
Sbjct: 274 DEIHYFDHPNMGMILQIRKMEQ 295