Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (256), Expect = 6e-27
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%)

Query: 59  PAINVDRAGSFADVSFRQSKGVTLLPSSAYQLNSEAQKLRNHAGFNVLLHTAWRQNDQGR 118
           P++     GS +    +   G  LL SS  Q  +    L    G   LLH  W+Q  QG+
Sbjct: 122 PSMIPSEIGSSSQTYAKLGSGPVLLASSQGQFANIVNSLSRERGNRSLLHMTWQQPMQGK 181

Query: 119 QSAPVFHIQAGRDFSGQFQANGSPVG----STVTAPVDGVSEMSIAN-------PLYELD 167
             +    + AG+DFS  +  +G  +     +T      G    S+ N       P+++LD
Sbjct: 182 SGSMPIRLFAGKDFSANYHFDGRQIVQQALNTSMQNTQGSQGTSLENSAPLLPSPVWQLD 241

Query: 168 GTLQIYVQHFLFAEAVLDLKKPSVREVVLQDSPLELGTNEEQGATVQAGMLESVSPKVQE 227
           GTL IY+ H+L+ E  L+L+K   + + +      + TN      V+      ++P    
Sbjct: 242 GTLNIYLSHYLYIETALNLRKEGRKLMPVPTDDSNINTNAAVTTPVKV-----MTP---- 292

Query: 228 ETFLKSYRLDQKRRMRSGETHYLDHPLMGVIIQVRRVAE 266
             +L S  L+Q RR++S E HYLDHP MG++IQ+R++A+
Sbjct: 293 --YLMSIPLEQNRRVKSDEIHYLDHPEMGMVIQIRKMAQ 329