Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Xanthomonas campestris pv. campestris strain 8004

 Score =  238 bits (606), Expect = 2e-66
 Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 29/396 (7%)

Query: 599 KATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVA 658
           +   PF+ T  Q      +  D+ Q   M RLV GDVG GKT VA  AA +A ++GKQVA
Sbjct: 272 RKALPFQLTGAQQRVFEQIAHDLAQPAPMLRLVQGDVGSGKTVVAALAAMLAVEHGKQVA 331

Query: 659 VLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKL 718
           +  PT LLA+QH  N R     L +R+  L+   + K +   + +VA G+  ++VGTH L
Sbjct: 332 LAAPTELLAEQHLANLRGWLEPLGVRIVWLAGKVTGKARVAAMAEVASGQAQVVVGTHAL 391

Query: 719 LSSEIRFADLGLLIVDEEHRFGVRQ----KEKVKAMRADVDILTLTATPIPRTLNMAMSG 774
           +   + F DL L I+DE+HRFGV Q    ++K  A  +    L +TATPIPRTL MA   
Sbjct: 392 MQDAVVFHDLALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMAAYA 451

Query: 775 MRDLSIIATPPARRLAIKTFVRQSE-DSVIREAVLREIMRGGQVYF---LHNQVETIDKV 830
              +S I   P  R  ++T V  +E    + E +      G Q Y+   L  + E  DK 
Sbjct: 452 DLHVSAIDELPPGRTPVQTIVLSAERRPELVERIRAACAEGRQAYWVCTLIEESEDTDKG 511

Query: 831 AAD----------------LEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTT 874
           A +                L   +P  R+ + HG+M+  E ++ M DF   R +LLV TT
Sbjct: 512 AQNGPPRIEAQAAQVTFETLSAQLPGVRVALVHGRMKPAEKQQAMLDFKQGRTDLLVATT 571

Query: 875 IIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKR 934
           +IE G+DVP A+ +I++ A+ LGLAQLHQLRGRVGR    +   LL   P ++   A +R
Sbjct: 572 VIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQGPLSLM--ARQR 629

Query: 935 LEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSG 970
           LE +    D   GF +A  DLE+RG GELLG  Q+G
Sbjct: 630 LETMRQTND---GFVIAERDLELRGPGELLGTRQTG 662