Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., ATP-dependent DNA helicase RecG from Synechocystis sp000284455 PCC 6803

 Score =  253 bits (645), Expect = 6e-71
 Identities = 144/404 (35%), Positives = 227/404 (56%), Gaps = 16/404 (3%)

Query: 577 YAKREIKPGFKFHLDREQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVG 636
           Y +++ +    F    E    F    PF  T  Q   +N +L D+ +   M+RLV GDVG
Sbjct: 377 YEQKQQQQSAIFTPHGELLEKFSDLLPFRLTQAQQRVVNEILQDLNKPSPMNRLVQGDVG 436

Query: 637 FGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKE 696
            GKT V + A   A   G Q A++ PT +LA+QH++     F  L + VE+L+      +
Sbjct: 437 SGKTVVGVFAILAALQGGYQAALMAPTEVLAEQHYQKLVSWFNLLYLPVELLTGSTKTAK 496

Query: 697 QKQILQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDI 756
           +++I   ++ G++ +LVGTH L+   + F  LGL+++DE+HRFGV+Q+ K+ A      +
Sbjct: 497 RREIHAQLSTGQLPLLVGTHALIQETVNFQRLGLVVIDEQHRFGVQQRAKLLAKGNAPHV 556

Query: 757 LTLTATPIPRTLNMAMSGMRDLS-IIATPPARRLAIKTFVRQSEDSVIREAVLREIMRGG 815
           L++TATPIPRTL + + G  ++S I   PP R+    + +   E   + E + RE+ +G 
Sbjct: 557 LSMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIHTSVITAKERPQMYELIRREVAQGR 616

Query: 816 QVYFLHNQVETIDKVAAD---------LEKLVPEARITVAHGQMRERELEKVMNDFYHQR 866
           QVY +   +E  +K+             EK+ P   I + HG+++  E E  +  F  ++
Sbjct: 617 QVYIIFPAIEESEKLDIKAAVEEHKYLTEKIFPNFNIGLLHGRLKSAEKEAALTAFREKQ 676

Query: 867 FNLLVCTTIIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKA 926
             ++V TT+IE G+DVP A  ++++ A+  GL+QLHQLRGRVGR  HQ+Y  L+T    +
Sbjct: 677 TEIIVSTTVIEVGVDVPNATVMVIENAERFGLSQLHQLRGRVGRGSHQSYCLLVT---NS 733

Query: 927 ITKDAVKRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSG 970
            + DA +RL  +   +D   GF +A  DL +RG GE LG +QSG
Sbjct: 734 KSNDARQRLGVMEQSQD---GFFIAEMDLRLRGPGEFLGTKQSG 774