Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., ATP-dependent DNA helicase RecG from Sinorhizobium meliloti 1021

 Score =  236 bits (602), Expect = 5e-66
 Identities = 144/380 (37%), Positives = 214/380 (56%), Gaps = 15/380 (3%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  PF  T+ Q+ A++ +L+DM  A  M RL+ GDVG GKT VA+ A   A ++G Q  +
Sbjct: 268 AALPFSLTNSQSAAVDEILADMSGADRMLRLLQGDVGSGKTAVALMAMLAAVESGGQAVL 327

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT +LA+QH        A   I +++L+     KE+  IL+ +A G+  +++GTH L 
Sbjct: 328 MAPTEILARQHHATLSRMAAPAGITIDILTGRTKGKERDAILERIASGETQLVIGTHALF 387

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLS 779
              + +  L L +VDE+HRFGV Q+ ++ A      +L +TATPIPRTL +A  G  D+S
Sbjct: 388 QDAVIYRQLVLAVVDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVS 447

Query: 780 IIATPPARRLAIKTFVRQSE--DSVIR--EAVLREIMRGGQVYFLHNQVETIDKVAADLE 835
            +   PA R  I+T    +E  D ++   +A LR+  +   +  L  + E  D ++AD E
Sbjct: 448 KLTEKPAGRKPIQTVTIPNERTDEIVERLDAALRQGKKAYWICPLVEESEETDAMSAD-E 506

Query: 836 KLVPEAR-----ITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIM 890
           +    AR     + + HG+M   E + VM  F +    LLV TT++E G+DVP A  +++
Sbjct: 507 RYQSLARRFGKDVGLVHGRMAGPEKDAVMLAFKNGEIRLLVATTVVEVGVDVPDATIMVI 566

Query: 891 DRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTL 950
           + A+  GLAQLHQLRGRVGR    +   LL   P  +++    RL  +   ED   GF +
Sbjct: 567 EHAERFGLAQLHQLRGRVGRGDEASTCILLYKSP--LSEAGRARLSVLRESED---GFLI 621

Query: 951 ATHDLEIRGAGELLGEEQSG 970
           A  DL++RG GELLG  QSG
Sbjct: 622 AEEDLKLRGEGELLGTRQSG 641