Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., ATP-dependent DNA helicase RecG (NCBI) from Rhodospirillum rubrum S1H

 Score =  241 bits (616), Expect = 1e-67
 Identities = 149/384 (38%), Positives = 217/384 (56%), Gaps = 19/384 (4%)

Query: 600 ATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAV 659
           A  PF  T  Q+ ++  +  DM     M RL+ GDVG GKT VA+     A + G Q A+
Sbjct: 266 AALPFALTGAQSRSLAEIDGDMASPARMLRLLQGDVGSGKTVVALLTMLTAVEAGAQAAL 325

Query: 660 LVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLL 719
           + PT +LA+QH E      A+  +R+ +L+     + +  +L+ +A G++DILVGTH L 
Sbjct: 326 MAPTEILARQHIETLAPLCASAGVRLGLLTGRDKGRARAALLEALAAGEIDILVGTHALF 385

Query: 720 SSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLS 779
             ++ FA L +++VDE+HRFGV Q+  +      VD+L +TATPIPRTL +   G  D+S
Sbjct: 386 QDDVVFAALAVVVVDEQHRFGVHQRLALSDKGRAVDVLVMTATPIPRTLTLTHYGDMDIS 445

Query: 780 IIATPPARRLAIKTFVRQSE--DSVIREAVLREIMRGGQVYFLHNQVE---------TID 828
            +   P  RL   T V   +  D VI  AV R I  G +VY++   +E          +D
Sbjct: 446 RLDEKPPGRLPADTRVLPIDRLDDVI-AAVARAIDGGAKVYWVCPLIEDSETGDMAAAVD 504

Query: 829 KVAADLEKLVPE--ARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTAN 886
           + A   ++L P    R+ + HG+M+  E + VM  F     +LLV TT+IE G++VP+A 
Sbjct: 505 RQALLADRLGPRLGPRVGLVHGRMKPGEKDAVMEAFSGNGLDLLVATTVIEVGVNVPSAT 564

Query: 887 TIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGA 946
            ++++ A+  GLAQLHQLRGR+GR   ++   LL  PP   T  A  RLE +   +D   
Sbjct: 565 VMVIEHAERFGLAQLHQLRGRIGRGGGRSTCLLLYAPPLGETARA--RLETMRRTDD--- 619

Query: 947 GFTLATHDLEIRGAGELLGEEQSG 970
           GF +A  DL +RGAGE+LG  QSG
Sbjct: 620 GFEIAEEDLRLRGAGEVLGTRQSG 643